Annotation Detail for C3orf19
Basic Information Top
Gene Symbol: | C3orf19 ( FLJ33839 ) |
---|---|
Gene Full Name: | chromosome 3 open reading frame 19 |
Band: | 3p25.1 |
Quick Links | Entrez ID:51244; OMIM: NA; Uniprot ID:CC019_HUMAN; ENSEMBL ID: ENSG00000154781; HGNC ID: |
Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.517820
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
embryoid body | 1 / 70761 | 14 | |
blastocyst | 1 / 62319 | 16 | |
fetus | 27 / 564012 | 47 | |
neonate | 1 / 31097 | 32 | |
infant | 0 / 23620 | 0 | |
juvenile | 0 / 55556 | 0 | |
adult | 78 / 1939121 | 40 |
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
adrenal tumor | 0 / 12794 | 0 | |
bladder carcinoma | 0 / 17475 | 0 | |
breast (mammary gland) tumor | 1 / 94178 | 10 | |
cervical tumor | 0 / 34366 | 0 | |
chondrosarcoma | 8 / 82823 | 96 | |
colorectal tumor | 7 / 114246 | 61 | |
esophageal tumor | 0 / 17290 | 0 | |
gastrointestinal tumor | 6 / 119369 | 50 | |
germ cell tumor | 7 / 263845 | 26 | |
glioma | 1 / 106883 | 9 | |
head and neck tumor | 4 / 136302 | 29 | |
kidney tumor | 1 / 68959 | 14 | |
leukemia | 0 / 95842 | 0 | |
liver tumor | 0 / 96359 | 0 | |
lung tumor | 1 / 103127 | 9 | |
lymphoma | 3 / 71755 | 41 | |
non-neoplasia | 3 / 97250 | 30 | |
normal | 93 / 3360307 | 27 | |
ovarian tumor | 6 / 76682 | 78 | |
pancreatic tumor | 1 / 104616 | 9 | |
primitive neuroectodermal tumor of the CNS | 2 / 125680 | 15 | |
prostate cancer | 3 / 102680 | 29 | |
retinoblastoma | 0 / 46356 | 0 | |
skin tumor | 2 / 124949 | 16 | |
soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
uterine tumor | 0 / 90257 | 0 |
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
adipose tissue | 0 / 13106 | 0 | |
adrenal gland | 0 / 33197 | 0 | |
ascites | 4 / 40015 | 99 | |
bladder | 0 / 29757 | 0 | |
blood | 3 / 123478 | 24 | |
bone | 5 / 71655 | 69 | |
bone marrow | 0 / 48801 | 0 | |
brain | 14 / 1100989 | 12 | |
cervix | 0 / 48171 | 0 | |
connective tissue | 2 / 149255 | 13 | |
ear | 0 / 16212 | 0 | |
embryonic tissue | 4 / 215722 | 18 | |
esophagus | 0 / 20209 | 0 | |
eye | 7 / 211054 | 33 | |
heart | 4 / 89626 | 44 | |
intestine | 10 / 234472 | 42 | |
kidney | 6 / 211777 | 28 | |
larynx | 0 / 24145 | 0 | |
liver | 4 / 207743 | 19 | |
lung | 19 / 336974 | 56 | |
lymph | 2 / 44270 | 45 | |
lymph node | 5 / 91610 | 54 | |
mammary gland | 4 / 153271 | 26 | |
mouth | 2 / 67052 | 29 | |
muscle | 4 / 107715 | 37 | |
nerve | 0 / 15768 | 0 | |
ovary | 8 / 102051 | 78 | |
pancreas | 2 / 214812 | 9 | |
parathyroid | 1 / 20539 | 48 | |
pharynx | 0 / 41328 | 0 | |
pituitary gland | 0 / 16585 | 0 | |
placenta | 7 / 280825 | 24 | |
prostate | 7 / 189345 | 36 | |
salivary gland | 0 / 20155 | 0 | |
skin | 3 / 210574 | 14 | |
spleen | 0 / 53952 | 0 | |
stomach | 2 / 96619 | 20 | |
testis | 4 / 330442 | 12 | |
thymus | 1 / 81131 | 12 | |
thyroid | 3 / 47473 | 63 | |
tonsil | 0 / 16999 | 0 | |
trachea | 0 / 52413 | 0 | |
umbilical cord | 1 / 13680 | 73 | |
uterus | 5 / 232878 | 21 | |
vascular | 0 / 51780 | 0 |
Human Whole Brain Microarrayview in Allen Brain Atlas
- Probe name: A_24_P144481
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue | Expression(mean ± stddev) | Expression Bar |
---|---|---|
Amygdala | 8.36 ± 0.22 | |
Basal Forebrain | 8.28 ± 0.26 | |
Basal Part of Pons | 8.04 ± 0.18 | |
Cerebellar Cortex | 8.22 ± 0.21 | |
Cerebellar Nuclei | 8.35 ± 0.12 | |
Claustrum | 8.4 ± 0.35 | |
Epithalamus | 8.24 ± 0.23 | |
Frontal Lobe | 8.14 ± 0.23 | |
Globus Pallidus | 8.55 ± 0.12 | |
Hypothalamus | 8.11 ± 0.23 | |
Insula | 8.26 ± 0.25 | |
Limbic Lobe | 8.21 ± 0.25 | |
Mesencephalon | 8.3 ± 0.23 | |
Myelencephalon | 8.22 ± 0.26 | |
Occipital Lobe | 8.47 ± 0.29 | |
Parietal Lobe | 8.27 ± 0.22 | |
Pontine Tegmentum | 8.27 ± 0.27 | |
Striatum | 8.31 ± 0.21 | |
Subthalamus | 8.22 ± 0.34 | |
Temporal Lobe | 8.15 ± 0.21 | |
Thalamus | 8.32 ± 0.17 | |
White Matter | 9.05 ± 0.17 |
Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
---|---|---|---|---|
C130022K22Rik | CB | Cerebellum | 6.97 | |
7.72 | ||||
C130022K22Rik | CTX | Cerebral cortex | 12.33 | |
8.46 | ||||
C130022K22Rik | HIP | Hippocampal region | 10.43 | |
10.53 | ||||
C130022K22Rik | HPF | Hippocampal formation | 13.93 | |
12.67 | ||||
C130022K22Rik | HY | Hypothalamus | 1.58 | |
1.22 | ||||
C130022K22Rik | LSX | Lateral septal complex | 0.15 | |
0.1 | ||||
C130022K22Rik | MB | Midbrain | 6.19 | |
5.63 | ||||
C130022K22Rik | MY | Medulla | 15.63 | |
15.88 | ||||
C130022K22Rik | OLF | Olfactory bulb | 20.17 | |
14.92 | ||||
C130022K22Rik | P | Pons | 8.33 | |
8.19 | ||||
C130022K22Rik | PAL | Pallidum | 2.56 | |
2.03 | ||||
C130022K22Rik | RHP | Retrohippocampal region | 19.28 | |
15.27 | ||||
C130022K22Rik | sAMY | Striatum-like amygdalar nuclei | 3.72 | |
2.84 | ||||
C130022K22Rik | STR | Striatum | 4.62 | |
3.29 | ||||
C130022K22Rik | STRd | Striatum dorsal region | 4.56 | |
3.31 | ||||
C130022K22Rik | STRv | Striatum ventral region | 6.67 | |
4.29 | ||||
C130022K22Rik | TH | Thalamus | 2.61 | |
2.07 |