Annotation Detail for C3orf19
Basic Information Top
| Gene Symbol: | C3orf19 ( FLJ33839 ) |
|---|---|
| Gene Full Name: | chromosome 3 open reading frame 19 |
| Band: | 3p25.1 |
| Quick Links | Entrez ID:51244; OMIM: NA; Uniprot ID:CC019_HUMAN; ENSEMBL ID: ENSG00000154781; HGNC ID: |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.517820
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 1 / 62319 | 16 | |
| fetus | 27 / 564012 | 47 | |
| neonate | 1 / 31097 | 32 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 78 / 1939121 | 40 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 |  |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 8 / 82823 | 96 |  |
| colorectal tumor | 7 / 114246 | 61 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 6 / 119369 | 50 | |
| germ cell tumor | 7 / 263845 | 26 | |
| glioma | 1 / 106883 | 9 | |
| head and neck tumor | 4 / 136302 | 29 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 3 / 71755 | 41 | |
| non-neoplasia | 3 / 97250 | 30 | |
| normal | 93 / 3360307 | 27 | |
| ovarian tumor | 6 / 76682 | 78 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 2 / 125680 | 15 | |
| prostate cancer | 3 / 102680 | 29 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 2 / 124949 | 16 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 4 / 40015 | 99 | |
| bladder | 0 / 29757 | 0 | |
| blood | 3 / 123478 | 24 | |
| bone | 5 / 71655 | 69 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 14 / 1100989 | 12 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 2 / 149255 | 13 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 4 / 215722 | 18 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 7 / 211054 | 33 | |
| heart | 4 / 89626 | 44 | |
| intestine | 10 / 234472 | 42 | |
| kidney | 6 / 211777 | 28 | |
| larynx | 0 / 24145 | 0 | |
| liver | 4 / 207743 | 19 | |
| lung | 19 / 336974 | 56 | |
| lymph | 2 / 44270 | 45 | |
| lymph node | 5 / 91610 | 54 | |
| mammary gland | 4 / 153271 | 26 | |
| mouth | 2 / 67052 | 29 | |
| muscle | 4 / 107715 | 37 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 8 / 102051 | 78 | |
| pancreas | 2 / 214812 | 9 | |
| parathyroid | 1 / 20539 | 48 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 7 / 280825 | 24 | |
| prostate | 7 / 189345 | 36 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 3 / 210574 | 14 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 2 / 96619 | 20 | |
| testis | 4 / 330442 | 12 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 3 / 47473 | 63 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 1 / 13680 | 73 | |
| uterus | 5 / 232878 | 21 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_24_P144481
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 8.36 ± 0.22 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 8.28 ± 0.26 | |
| Basal Part of Pons | 8.04 ± 0.18 | |
| Cerebellar Cortex | 8.22 ± 0.21 | |
| Cerebellar Nuclei | 8.35 ± 0.12 | |
| Claustrum | 8.4 ± 0.35 | |
| Epithalamus | 8.24 ± 0.23 | |
| Frontal Lobe | 8.14 ± 0.23 | |
| Globus Pallidus | 8.55 ± 0.12 | |
| Hypothalamus | 8.11 ± 0.23 | |
| Insula | 8.26 ± 0.25 | |
| Limbic Lobe | 8.21 ± 0.25 | |
| Mesencephalon | 8.3 ± 0.23 | |
| Myelencephalon | 8.22 ± 0.26 | |
| Occipital Lobe | 8.47 ± 0.29 | |
| Parietal Lobe | 8.27 ± 0.22 | |
| Pontine Tegmentum | 8.27 ± 0.27 | |
| Striatum | 8.31 ± 0.21 | |
| Subthalamus | 8.22 ± 0.34 | |
| Temporal Lobe | 8.15 ± 0.21 | |
| Thalamus | 8.32 ± 0.17 | |
| White Matter | 9.05 ± 0.17 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| C130022K22Rik | CB | Cerebellum | 6.97 | |
| 7.72 | | |||
| C130022K22Rik | CTX | Cerebral cortex | 12.33 | |
| 8.46 | | |||
| C130022K22Rik | HIP | Hippocampal region | 10.43 | |
| 10.53 | | |||
| C130022K22Rik | HPF | Hippocampal formation | 13.93 | |
| 12.67 | | |||
| C130022K22Rik | HY | Hypothalamus | 1.58 | |
| 1.22 | | |||
| C130022K22Rik | LSX | Lateral septal complex | 0.15 | |
| 0.1 | | |||
| C130022K22Rik | MB | Midbrain | 6.19 | |
| 5.63 | | |||
| C130022K22Rik | MY | Medulla | 15.63 | |
| 15.88 | | |||
| C130022K22Rik | OLF | Olfactory bulb | 20.17 | |
| 14.92 | | |||
| C130022K22Rik | P | Pons | 8.33 | |
| 8.19 | | |||
| C130022K22Rik | PAL | Pallidum | 2.56 | |
| 2.03 | | |||
| C130022K22Rik | RHP | Retrohippocampal region | 19.28 | |
| 15.27 | | |||
| C130022K22Rik | sAMY | Striatum-like amygdalar nuclei | 3.72 | |
| 2.84 | | |||
| C130022K22Rik | STR | Striatum | 4.62 | |
| 3.29 | | |||
| C130022K22Rik | STRd | Striatum dorsal region | 4.56 | |
| 3.31 | | |||
| C130022K22Rik | STRv | Striatum ventral region | 6.67 | |
| 4.29 | | |||
| C130022K22Rik | TH | Thalamus | 2.61 | |
| 2.07 | |