AutismKB 2.0

Annotation Detail for DNAJC27


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Basic Information Top
Gene Symbol:DNAJC27 ( DKFZp434N211,RBJ,RabJS )
Gene Full Name: DnaJ (Hsp40) homolog, subfamily C, member 27
Band: 2p23.3
Quick LinksEntrez ID:51277; OMIM: 613527; Uniprot ID:DJC27_HUMAN; ENSEMBL ID: ENSG00000115137; HGNC ID: 30290
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst1 / 6231916
fetus29 / 56401251
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult27 / 193912113
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor2 / 11936916
germ cell tumor12 / 26384545
glioma0 / 1068830 
head and neck tumor1 / 1363027
kidney tumor1 / 6895914
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia6 / 9725061
normal105 / 336030731
ovarian tumor2 / 7668226
pancreatic tumor5 / 10461647
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma2 / 4635643
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland1 / 3319730
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone0 / 716550 
bone marrow0 / 488010 
brain25 / 110098922
cervix0 / 481710 
connective tissue1 / 1492556
ear0 / 162120 
embryonic tissue2 / 2157229
esophagus0 / 202090 
eye15 / 21105471
heart3 / 8962633
intestine2 / 2344728
kidney8 / 21177737
larynx0 / 241450 
liver0 / 2077430 
lung11 / 33697432
lymph0 / 442700 
lymph node0 / 916100 
mammary gland1 / 1532716
mouth0 / 670520 
muscle3 / 10771527
nerve0 / 157680 
ovary3 / 10205129
pancreas11 / 21481251
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta2 / 2808257
prostate5 / 18934526
salivary gland0 / 201550 
skin0 / 2105740 
spleen0 / 539520 
stomach2 / 9661920
testis24 / 33044272
thymus1 / 8113112
thyroid1 / 4747321
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus1 / 2328784
vascular0 / 517800 
Microarray in BioGPS Top
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P17275
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala7.05 ± 0.39
Basal Forebrain7.33 ± 0.14
Basal Part of Pons7.55 ± 0.2
Cerebellar Cortex7.45 ± 0.21
Cerebellar Nuclei7.9 ± 0.17
Claustrum6.98 ± 0.32
Epithalamus7.5 ± 0.35
Frontal Lobe7.29 ± 0.28
Globus Pallidus7.39 ± 0.43
Hypothalamus7.47 ± 0.26
Insula7.27 ± 0.26
Limbic Lobe7.31 ± 0.27
Mesencephalon7.38 ± 0.33
Myelencephalon7.29 ± 0.36
Occipital Lobe7.47 ± 0.29
Parietal Lobe7.41 ± 0.29
Pontine Tegmentum7.42 ± 0.3
Striatum7.9 ± 0.36
Subthalamus8.07 ± 0.15
Temporal Lobe7.26 ± 0.22
Thalamus7.28 ± 0.22
White Matter8.07 ± 0.28
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
C330021A05RikCBCerebellum66.42
100
C330021A05RikCTXCerebral cortex100
100
C330021A05RikHIPHippocampal region93.87
100
C330021A05RikHPFHippocampal formation100
100
C330021A05RikHYHypothalamus100
100
C330021A05RikLSXLateral septal complex100
100
C330021A05RikMBMidbrain100
100
C330021A05RikMYMedulla100
100
C330021A05RikOLFOlfactory bulb100
100
C330021A05RikPPons100
100
C330021A05RikPALPallidum100
100
C330021A05RikRHPRetrohippocampal region100
100
C330021A05RiksAMYStriatum-like amygdalar nuclei100
100
C330021A05RikSTRStriatum100
100
C330021A05RikSTRdStriatum dorsal region100
100
C330021A05RikSTRvStriatum ventral region100
100
C330021A05RikTHThalamus100
100
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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