AutismKB 2.0

Annotation Detail for ANKMY1


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Basic Information Top
Gene Symbol:ANKMY1 ( DKFZp686D20155,DKFZp686L21237,FLJ20499,ZMYND13 )
Gene Full Name: ankyrin repeat and MYND domain containing 1
Band: 2q37.3
Quick LinksEntrez ID:51281; OMIM: NA; Uniprot ID:ANKY1_HUMAN; ENSEMBL ID: ENSG00000144504; HGNC ID: 20987
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body1 / 7076114
blastocyst2 / 6231932
fetus4 / 5640127
neonate0 / 310970 
infant0 / 236200 
juvenile2 / 5555635
adult31 / 193912115
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma1 / 8282312
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor4 / 11936933
germ cell tumor5 / 26384518
glioma1 / 1068839
head and neck tumor4 / 13630229
kidney tumor0 / 689590 
leukemia1 / 9584210
liver tumor1 / 9635910
lung tumor2 / 10312719
lymphoma3 / 7175541
non-neoplasia0 / 972500 
normal46 / 336030713
ovarian tumor0 / 766820 
pancreatic tumor1 / 1046169
primitive neuroectodermal tumor of the CNS2 / 12568015
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor2 / 12494916
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor2 / 9025722
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood4 / 12347832
bone1 / 7165513
bone marrow0 / 488010 
brain14 / 110098912
cervix2 / 4817141
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue3 / 21572213
esophagus0 / 202090 
eye0 / 2110540 
heart2 / 8962622
intestine2 / 2344728
kidney0 / 2117770 
larynx1 / 2414541
liver1 / 2077434
lung6 / 33697417
lymph1 / 4427022
lymph node1 / 9161010
mammary gland0 / 1532710 
mouth2 / 6705229
muscle4 / 10771537
nerve0 / 157680 
ovary0 / 1020510 
pancreas1 / 2148124
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta4 / 28082514
prostate0 / 1893450 
salivary gland0 / 201550 
skin2 / 2105749
spleen1 / 5395218
stomach4 / 9661941
testis39 / 330442118
thymus2 / 8113124
thyroid1 / 4747321
tonsil0 / 169990 
trachea3 / 5241357
umbilical cord0 / 136800 
uterus3 / 23287812
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 220280_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts5.25
Adipocyte4.25
AdrenalCortex4.6
Adrenalgland3.65
Amygdala4.45
Appendix4.3
AtrioventricularNode3.4
BDCA4+_DentriticCells4.6
Bonemarrow4.35
BronchialEpithelialCells4.2
CD105+_Endothelial4.3
CD14+_Monocytes4.6
CD19+_BCells(neg._sel.)4.55
CD33+_Myeloid5.45
CD34+5.4
CD4+_Tcells4.7
CD56+_NKCells5.1
CD71+_EarlyErythroid4.05
CD8+_Tcells4.1
CardiacMyocytes5.7
Caudatenucleus3.8
Cerebellum3.45
CerebellumPeduncles4.9
CiliaryGanglion3.1
CingulateCortex4.35
Colorectaladenocarcinoma4.3
DorsalRootGanglion3.4
FetalThyroid4.2
Fetalbrain4.2
Fetalliver3.75
Fetallung3.55
GlobusPallidus3.2
Heart5.6
Hypothalamus4.6
Kidney3.55
Leukemia_chronicMyelogenousK-5623.9
Leukemia_promyelocytic-HL-603.8
Leukemialymphoblastic(MOLT-4)3.45
Liver6.35
Lung4.7
Lymphnode3.65
Lymphoma_burkitts(Daudi)5.5
Lymphoma_burkitts(Raji)6.05
MedullaOblongata3.85
OccipitalLobe3.85
OlfactoryBulb3.35
Ovary2.9
Pancreas3.9
PancreaticIslet4.6
ParietalLobe4.5
Pituitary5
Placenta4.45
Pons4.1
PrefrontalCortex5.25
Prostate4.95
Salivarygland3.4
SkeletalMuscle4.95
Skin3.4
SmoothMuscle4.9
Spinalcord4.55
SubthalamicNucleus3.9
SuperiorCervicalGanglion4.9
TemporalLobe3.95
Testis6.9
TestisGermCell3.7
TestisIntersitial6.75
TestisLeydigCell5.15
TestisSeminiferousTubule3.7
Thalamus4.35
Thymus3.35
Thyroid5.35
Tongue4.3
Tonsil4.15
Trachea3.55
TrigeminalGanglion4.45
Uterus3.5
UterusCorpus3.9
WholeBlood4.7
Wholebrain3.6
colon4.3
pineal_day5.34
pineal_night5.1
retina5.15
small_intestine4.1
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_24_P402106
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala4.6 ± 0.76
Basal Forebrain4.65 ± 0.34
Basal Part of Pons3.56 ± 0.74
Cerebellar Cortex3.81 ± 0.63
Cerebellar Nuclei4.23 ± 0.66
Claustrum5.05 ± 1.08
Epithalamus4.82 ± 0.61
Frontal Lobe3.66 ± 0.87
Globus Pallidus5.55 ± 0.39
Hypothalamus3.91 ± 0.85
Insula3.89 ± 0.67
Limbic Lobe4.06 ± 0.89
Mesencephalon4.31 ± 0.77
Myelencephalon4.12 ± 0.91
Occipital Lobe4.19 ± 0.78
Parietal Lobe4.23 ± 0.99
Pontine Tegmentum3.97 ± 0.83
Striatum4.33 ± 0.9
Subthalamus4.07 ± 0.95
Temporal Lobe3.97 ± 0.79
Thalamus3.87 ± 0.65
White Matter5.77 ± 0.61
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Ankmy1CBCerebellum2.77
4.8
Ankmy1CTXCerebral cortex1.35
1.4
Ankmy1HIPHippocampal region1.78
2.65
Ankmy1HPFHippocampal formation1.46
1.87
Ankmy1HYHypothalamus0.56
0.56
Ankmy1LSXLateral septal complex0.03
0
Ankmy1MBMidbrain0.83
1.01
Ankmy1MYMedulla1.91
1.91
Ankmy1OLFOlfactory bulb0.75
0.84
Ankmy1PPons0.91
1
Ankmy1PALPallidum1.17
0.9
Ankmy1RHPRetrohippocampal region0.82
0.6
Ankmy1sAMYStriatum-like amygdalar nuclei1.8
1.94
Ankmy1STRStriatum0.98
0.92
Ankmy1STRdStriatum dorsal region1.07
0.75
Ankmy1STRvStriatum ventral region1
1.22
Ankmy1THThalamus1.31
1.59
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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