Annotation Detail for POLK
Basic Information Top
| Gene Symbol: | POLK ( DINB1,DINP,POLQ ) |
|---|---|
| Gene Full Name: | polymerase (DNA directed) kappa |
| Band: | 5q13.3 |
| Quick Links | Entrez ID:51426; OMIM: 605650; Uniprot ID:POLK_HUMAN; ENSEMBL ID: ENSG00000122008; HGNC ID: 9183 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.726312
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 3 / 70761 | 42 |  |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 27 / 564012 | 47 | |
| neonate | 1 / 31097 | 32 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 51 / 1939121 | 26 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 |  |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 3 / 94178 | 31 | |
| cervical tumor | 2 / 34366 | 58 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 1 / 114246 | 8 |  |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 2 / 119369 | 16 | |
| germ cell tumor | 9 / 263845 | 34 | |
| glioma | 1 / 106883 | 9 | |
| head and neck tumor | 5 / 136302 | 36 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 2 / 96359 | 20 | |
| lung tumor | 2 / 103127 | 19 | |
| lymphoma | 2 / 71755 | 27 | |
| non-neoplasia | 5 / 97250 | 51 | |
| normal | 116 / 3360307 | 34 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 4 / 102680 | 38 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 2 / 124949 | 16 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 4 / 90257 | 44 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 2 / 33197 | 60 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 1 / 29757 | 33 | |
| blood | 1 / 123478 | 8 | |
| bone | 2 / 71655 | 27 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 54 / 1100989 | 49 | |
| cervix | 2 / 48171 | 41 | |
| connective tissue | 3 / 149255 | 20 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 3 / 215722 | 13 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 5 / 211054 | 23 | |
| heart | 2 / 89626 | 22 | |
| intestine | 5 / 234472 | 21 | |
| kidney | 3 / 211777 | 14 | |
| larynx | 0 / 24145 | 0 | |
| liver | 6 / 207743 | 28 | |
| lung | 15 / 336974 | 44 | |
| lymph | 1 / 44270 | 22 | |
| lymph node | 1 / 91610 | 10 | |
| mammary gland | 5 / 153271 | 32 | |
| mouth | 3 / 67052 | 44 | |
| muscle | 6 / 107715 | 55 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 1 / 102051 | 9 | |
| pancreas | 3 / 214812 | 13 | |
| parathyroid | 2 / 20539 | 97 | |
| pharynx | 2 / 41328 | 48 | |
| pituitary gland | 3 / 16585 | 180 | |
| placenta | 5 / 280825 | 17 | |
| prostate | 5 / 189345 | 26 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 3 / 210574 | 14 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 2 / 96619 | 20 | |
| testis | 13 / 330442 | 39 | |
| thymus | 2 / 81131 | 24 | |
| thyroid | 3 / 47473 | 63 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 7 / 52413 | 133 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 9 / 232878 | 38 | |
| vascular | 6 / 51780 | 115 | |
Microarray in - Probe name: A_24_P303160
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 6.79 ± 0.31 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 6.96 ± 0.19 | |
| Basal Part of Pons | 6.57 ± 0.31 | |
| Cerebellar Cortex | 6.9 ± 0.27 | |
| Cerebellar Nuclei | 7.07 ± 0.29 | |
| Claustrum | 6.92 ± 0.22 | |
| Epithalamus | 7.04 ± 0.28 | |
| Frontal Lobe | 6.68 ± 0.3 | |
| Globus Pallidus | 7.28 ± 0.32 | |
| Hypothalamus | 6.85 ± 0.24 | |
| Insula | 6.71 ± 0.17 | |
| Limbic Lobe | 6.77 ± 0.29 | |
| Mesencephalon | 6.81 ± 0.36 | |
| Myelencephalon | 6.79 ± 0.33 | |
| Occipital Lobe | 7.14 ± 0.34 | |
| Parietal Lobe | 6.74 ± 0.29 | |
| Pontine Tegmentum | 6.89 ± 0.31 | |
| Striatum | 7.03 ± 0.34 | |
| Subthalamus | 6.8 ± 0.08 | |
| Temporal Lobe | 6.68 ± 0.23 | |
| Thalamus | 6.79 ± 0.29 | |
| White Matter | 7.95 ± 0.14 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Polk | CB | Cerebellum | 48.55 | |
| 56.63 | | |||
| Polk | CTX | Cerebral cortex | 34.54 | |
| 21.42 | | |||
| Polk | HIP | Hippocampal region | 5.38 | |
| 4.31 | | |||
| Polk | HPF | Hippocampal formation | 26.43 | |
| 21.84 | | |||
| Polk | HY | Hypothalamus | 37.29 | |
| 21.37 | | |||
| Polk | LSX | Lateral septal complex | 76 | |
| 49.21 | | |||
| Polk | MB | Midbrain | 37.54 | |
| 25.23 | | |||
| Polk | MY | Medulla | 44.84 | |
| 36.4 | | |||
| Polk | OLF | Olfactory bulb | 77.78 | |
| 56.37 | | |||
| Polk | P | Pons | 32.07 | |
| 24.37 | | |||
| Polk | PAL | Pallidum | 40.15 | |
| 28.58 | | |||
| Polk | RHP | Retrohippocampal region | 52.86 | |
| 40.68 | | |||
| Polk | sAMY | Striatum-like amygdalar nuclei | 80.97 | |
| 56.1 | | |||
| Polk | STR | Striatum | 20.15 | |
| 13.06 | | |||
| Polk | STRd | Striatum dorsal region | 5.98 | |
| 4.13 | | |||
| Polk | STRv | Striatum ventral region | 17.88 | |
| 10.35 | | |||
| Polk | TH | Thalamus | 48.44 | |
| 29.88 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| POLK_HUMAN_764 | 23 | 764 | 786 | QPYLCEVKTGQALVCPVCNVEQK | PRIDE |