Annotation Detail for EVL
Basic Information Top
Gene Symbol: | EVL ( RNB6 ) |
---|---|
Gene Full Name: | Enah/Vasp-like |
Band: | 14q32.2 |
Quick Links | Entrez ID:51466; OMIM: NA; Uniprot ID:EVL_HUMAN; ENSEMBL ID: ENSG00000196405; HGNC ID: 20234 |
Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.125867
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
embryoid body | 4 / 70761 | 56 | |
blastocyst | 4 / 62319 | 64 | |
fetus | 98 / 564012 | 173 | |
neonate | 1 / 31097 | 32 | |
infant | 1 / 23620 | 42 | |
juvenile | 17 / 55556 | 305 | |
adult | 252 / 1939121 | 129 |
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
adrenal tumor | 0 / 12794 | 0 | |
bladder carcinoma | 1 / 17475 | 57 | |
breast (mammary gland) tumor | 19 / 94178 | 201 | |
cervical tumor | 2 / 34366 | 58 | |
chondrosarcoma | 6 / 82823 | 72 | |
colorectal tumor | 1 / 114246 | 8 | |
esophageal tumor | 0 / 17290 | 0 | |
gastrointestinal tumor | 4 / 119369 | 33 | |
germ cell tumor | 12 / 263845 | 45 | |
glioma | 18 / 106883 | 168 | |
head and neck tumor | 5 / 136302 | 36 | |
kidney tumor | 9 / 68959 | 130 | |
leukemia | 14 / 95842 | 146 | |
liver tumor | 3 / 96359 | 31 | |
lung tumor | 22 / 103127 | 213 | |
lymphoma | 23 / 71755 | 320 | |
non-neoplasia | 10 / 97250 | 102 | |
normal | 453 / 3360307 | 134 | |
ovarian tumor | 0 / 76682 | 0 | |
pancreatic tumor | 13 / 104616 | 124 | |
primitive neuroectodermal tumor of the CNS | 12 / 125680 | 95 | |
prostate cancer | 7 / 102680 | 68 | |
retinoblastoma | 11 / 46356 | 237 | |
skin tumor | 1 / 124949 | 8 | |
soft tissue/muscle tissue tumor | 5 / 125191 | 39 | |
uterine tumor | 14 / 90257 | 155 |
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
adipose tissue | 0 / 13106 | 0 | |
adrenal gland | 1 / 33197 | 30 | |
ascites | 1 / 40015 | 24 | |
bladder | 1 / 29757 | 33 | |
blood | 17 / 123478 | 137 | |
bone | 4 / 71655 | 55 | |
bone marrow | 1 / 48801 | 20 | |
brain | 175 / 1100989 | 158 | |
cervix | 3 / 48171 | 62 | |
connective tissue | 8 / 149255 | 53 | |
ear | 0 / 16212 | 0 | |
embryonic tissue | 13 / 215722 | 60 | |
esophagus | 0 / 20209 | 0 | |
eye | 52 / 211054 | 246 | |
heart | 16 / 89626 | 178 | |
intestine | 9 / 234472 | 38 | |
kidney | 14 / 211777 | 66 | |
larynx | 3 / 24145 | 124 | |
liver | 7 / 207743 | 33 | |
lung | 43 / 336974 | 127 | |
lymph | 6 / 44270 | 135 | |
lymph node | 19 / 91610 | 207 | |
mammary gland | 25 / 153271 | 163 | |
mouth | 0 / 67052 | 0 | |
muscle | 4 / 107715 | 37 | |
nerve | 1 / 15768 | 63 | |
ovary | 0 / 102051 | 0 | |
pancreas | 32 / 214812 | 148 | |
parathyroid | 0 / 20539 | 0 | |
pharynx | 2 / 41328 | 48 | |
pituitary gland | 1 / 16585 | 60 | |
placenta | 21 / 280825 | 74 | |
prostate | 14 / 189345 | 73 | |
salivary gland | 2 / 20155 | 99 | |
skin | 6 / 210574 | 28 | |
spleen | 17 / 53952 | 315 | |
stomach | 3 / 96619 | 31 | |
testis | 15 / 330442 | 45 | |
thymus | 61 / 81131 | 751 | |
thyroid | 2 / 47473 | 42 | |
tonsil | 12 / 16999 | 705 | |
trachea | 1 / 52413 | 19 | |
umbilical cord | 0 / 13680 | 0 | |
uterus | 24 / 232878 | 103 | |
vascular | 6 / 51780 | 115 |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 217838_s_at
Cell line | Expression level | Expression bar |
---|---|---|
721_B_lymphoblasts | 119.55 | |
Adipocyte | 19.9 | |
AdrenalCortex | 8.15 | |
Adrenalgland | 6.2 | |
Amygdala | 344.55 | |
Appendix | 5.25 | |
AtrioventricularNode | 3.55 | |
BDCA4+_DentriticCells | 63.35 | |
Bonemarrow | 21 | |
BronchialEpithelialCells | 5.3 | |
CD105+_Endothelial | 5.4 | |
CD14+_Monocytes | 56.55 | |
CD19+_BCells(neg._sel.) | 486.35 | |
CD33+_Myeloid | 28.85 | |
CD34+ | 51.65 | |
CD4+_Tcells | 1423 | |
CD56+_NKCells | 677.3 | |
CD71+_EarlyErythroid | 3.85 | |
CD8+_Tcells | 1410.15 | |
CardiacMyocytes | 27.45 | |
Caudatenucleus | 154.55 | |
Cerebellum | 88.35 | |
CerebellumPeduncles | 126.55 | |
CiliaryGanglion | 4.6 | |
CingulateCortex | 304.25 | |
Colorectaladenocarcinoma | 5.3 | |
DorsalRootGanglion | 3.9 | |
FetalThyroid | 46.75 | |
Fetalbrain | 592.7 | |
Fetalliver | 4.95 | |
Fetallung | 85.9 | |
GlobusPallidus | 132.15 | |
Heart | 56.25 | |
Hypothalamus | 236.45 | |
Kidney | 4 | |
Leukemia_chronicMyelogenousK-562 | 34.3 | |
Leukemia_promyelocytic-HL-60 | 9.95 | |
Leukemialymphoblastic(MOLT-4) | 439.4 | |
Liver | 42.6 | |
Lung | 346.75 | |
Lymphnode | 525.85 | |
Lymphoma_burkitts(Daudi) | 64.25 | |
Lymphoma_burkitts(Raji) | 192.35 | |
MedullaOblongata | 169.5 | |
OccipitalLobe | 199.4 | |
OlfactoryBulb | 25.35 | |
Ovary | 12.75 | |
Pancreas | 7.65 | |
PancreaticIslet | 51.35 | |
ParietalLobe | 133.45 | |
Pituitary | 50.1 | |
Placenta | 19.95 | |
Pons | 145.25 | |
PrefrontalCortex | 494.3 | |
Prostate | 145.2 | |
Salivarygland | 28.3 | |
SkeletalMuscle | 5.7 | |
Skin | 3.3 | |
SmoothMuscle | 51.1 | |
Spinalcord | 104.2 | |
SubthalamicNucleus | 193.4 | |
SuperiorCervicalGanglion | 4.5 | |
TemporalLobe | 151.1 | |
Testis | 25.95 | |
TestisGermCell | 28.9 | |
TestisIntersitial | 10.05 | |
TestisLeydigCell | 15.3 | |
TestisSeminiferousTubule | 22.85 | |
Thalamus | 246.65 | |
Thymus | 400 | |
Thyroid | 106.7 | |
Tongue | 6.3 | |
Tonsil | 222.6 | |
Trachea | 25.55 | |
TrigeminalGanglion | 3.95 | |
Uterus | 113.8 | |
UterusCorpus | 5.5 | |
WholeBlood | 222.65 | |
Wholebrain | 209.5 | |
colon | 13.4 | |
pineal_day | 351.94 | |
pineal_night | 291.08 | |
retina | 187.625 | |
small_intestine | 33.45 |
Human Whole Brain Microarrayview in Allen Brain Atlas
- Probe name: A_23_P129038
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue | Expression(mean ± stddev) | Expression Bar |
---|---|---|
Amygdala | 8.07 ± 0.49 | |
Basal Forebrain | 7.98 ± 0.09 | |
Basal Part of Pons | 7.74 ± 0.29 | |
Cerebellar Cortex | 7.51 ± 0.23 | |
Cerebellar Nuclei | 7.75 ± 0.21 | |
Claustrum | 8.36 ± 0.47 | |
Epithalamus | 6.92 ± 0.67 | |
Frontal Lobe | 7.66 ± 0.39 | |
Globus Pallidus | 7.46 ± 0.39 | |
Hypothalamus | 7.65 ± 0.34 | |
Insula | 7.78 ± 0.29 | |
Limbic Lobe | 7.79 ± 0.39 | |
Mesencephalon | 7.91 ± 0.35 | |
Myelencephalon | 7.77 ± 0.37 | |
Occipital Lobe | 7.97 ± 0.35 | |
Parietal Lobe | 7.81 ± 0.41 | |
Pontine Tegmentum | 7.59 ± 0.43 | |
Striatum | 7.84 ± 0.45 | |
Subthalamus | 7.56 ± 0.43 | |
Temporal Lobe | 7.81 ± 0.32 | |
Thalamus | 7.78 ± 0.27 | |
White Matter | 7.22 ± 0.39 |
Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
---|---|---|---|---|
Evl | CB | Cerebellum | 29.88 | |
49.96 | ||||
Evl | CTX | Cerebral cortex | 100 | |
100 | ||||
Evl | HIP | Hippocampal region | 50.38 | |
80.46 | ||||
Evl | HPF | Hippocampal formation | 71.56 | |
93.54 | ||||
Evl | HY | Hypothalamus | 100 | |
100 | ||||
Evl | LSX | Lateral septal complex | 100 | |
100 | ||||
Evl | MB | Midbrain | 99.11 | |
100 | ||||
Evl | MY | Medulla | 74.99 | |
100 | ||||
Evl | OLF | Olfactory bulb | 100 | |
100 | ||||
Evl | P | Pons | 81.88 | |
100 | ||||
Evl | PAL | Pallidum | 100 | |
100 | ||||
Evl | RHP | Retrohippocampal region | 100 | |
100 | ||||
Evl | sAMY | Striatum-like amygdalar nuclei | 100 | |
100 | ||||
Evl | STR | Striatum | 99.89 | |
89.49 | ||||
Evl | STRd | Striatum dorsal region | 91.96 | |
81.53 | ||||
Evl | STRv | Striatum ventral region | 100 | |
95.24 | ||||
Evl | TH | Thalamus | 100 | |
100 |
Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
---|---|---|---|---|---|
EVL_HUMAN_280 | 30 | 280 | 309 | AASQSDKPAEKKEDESQMEDPSTSPSPGTR | PRIDE |
EVL_HUMAN_35 | 13 | 35 | 47 | INIYHNTASNTFR | PRIDE |
EVL_HUMAN_397 | 19 | 397 | 415 | VKEEIIDAIRQELSGISTT | PRIDE |
PAp00035198 | 32 | 294 | 325 | KEDESQMEDPSTSPSPGTRAASQPPNSSEAGR | Peptide Atlas |