AutismKB 2.0

Annotation Detail for C9orf156


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Basic Information Top
Gene Symbol:C9orf156 ( HSPC219,NAP1 )
Gene Full Name: chromosome 9 open reading frame 156
Band: 9q22.33
Quick LinksEntrez ID:51531; OMIM: NA; Uniprot ID:NAP1_HUMAN; ENSEMBL ID: ENSG00000136932; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus6 / 56401210
neonate0 / 310970 
infant1 / 2362042
juvenile0 / 555560 
adult50 / 193912125
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma3 / 8282336
colorectal tumor1 / 1142468
esophageal tumor2 / 17290115
gastrointestinal tumor0 / 1193690 
germ cell tumor6 / 26384522
glioma0 / 1068830 
head and neck tumor2 / 13630214
kidney tumor2 / 6895929
leukemia4 / 9584241
liver tumor0 / 963590 
lung tumor12 / 103127116
lymphoma3 / 7175541
non-neoplasia1 / 9725010
normal85 / 336030725
ovarian tumor0 / 766820 
pancreatic tumor3 / 10461628
primitive neuroectodermal tumor of the CNS4 / 12568031
prostate cancer0 / 1026800 
retinoblastoma1 / 4635621
skin tumor2 / 12494916
soft tissue/muscle tissue tumor3 / 12519123
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood7 / 12347856
bone2 / 7165527
bone marrow0 / 488010 
brain13 / 110098911
cervix0 / 481710 
connective tissue3 / 14925520
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus2 / 2020998
eye5 / 21105423
heart0 / 896260 
intestine4 / 23447217
kidney3 / 21177714
larynx0 / 241450 
liver1 / 2077434
lung23 / 33697468
lymph2 / 4427045
lymph node8 / 9161087
mammary gland1 / 1532716
mouth0 / 670520 
muscle2 / 10771518
nerve0 / 157680 
ovary0 / 1020510 
pancreas4 / 21481218
parathyroid0 / 205390 
pharynx3 / 4132872
pituitary gland1 / 1658560
placenta6 / 28082521
prostate3 / 18934515
salivary gland0 / 201550 
skin23 / 210574109
spleen3 / 5395255
stomach0 / 966190 
testis9 / 33044227
thymus0 / 811310 
thyroid5 / 47473105
tonsil0 / 169990 
trachea2 / 5241338
umbilical cord0 / 136800 
uterus1 / 2328784
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 222195_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts7.2
Adipocyte5.4
AdrenalCortex6.05
Adrenalgland4.7
Amygdala5.6
Appendix6
AtrioventricularNode4.6
BDCA4+_DentriticCells7.2
Bonemarrow5.75
BronchialEpithelialCells5.35
CD105+_Endothelial5.9
CD14+_Monocytes5.9
CD19+_BCells(neg._sel.)6.8
CD33+_Myeloid8.7
CD34+6.95
CD4+_Tcells17.25
CD56+_NKCells8.15
CD71+_EarlyErythroid6.3
CD8+_Tcells8.3
CardiacMyocytes7.25
Caudatenucleus4.9
Cerebellum4.4
CerebellumPeduncles6.2
CiliaryGanglion3.95
CingulateCortex5.65
Colorectaladenocarcinoma5.5
DorsalRootGanglion4.55
FetalThyroid5.3
Fetalbrain5.45
Fetalliver5.25
Fetallung4.35
GlobusPallidus4.1
Heart7.1
Hypothalamus5.8
Kidney4.45
Leukemia_chronicMyelogenousK-5625
Leukemia_promyelocytic-HL-604.9
Leukemialymphoblastic(MOLT-4)4.35
Liver7.35
Lung5.9
Lymphnode4.9
Lymphoma_burkitts(Daudi)7
Lymphoma_burkitts(Raji)7.8
MedullaOblongata5
OccipitalLobe4.9
OlfactoryBulb4.3
Ovary3.65
Pancreas4.4
PancreaticIslet5.85
ParietalLobe5.75
Pituitary6.4
Placenta5.5
Pons5.2
PrefrontalCortex6.7
Prostate6.3
Salivarygland7.7
SkeletalMuscle6.9
Skin4.5
SmoothMuscle6.1
Spinalcord5.9
SubthalamicNucleus5
SuperiorCervicalGanglion6.55
TemporalLobe5
Testis4.85
TestisGermCell4.5
TestisIntersitial4.65
TestisLeydigCell6.25
TestisSeminiferousTubule4.7
Thalamus5.55
Thymus4.25
Thyroid6.65
Tongue5.35
Tonsil5.4
Trachea4.55
TrigeminalGanglion6.15
Uterus4.45
UterusCorpus5.15
WholeBlood7.3
Wholebrain4.5
colon5.5
pineal_day6.78
pineal_night6.6
retina6.575
small_intestine5.25
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_24_P212860
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala5.46 ± 0.4
Basal Forebrain5.81 ± 0.26
Basal Part of Pons5.08 ± 0.42
Cerebellar Cortex5.39 ± 0.3
Cerebellar Nuclei5.52 ± 0.36
Claustrum5.42 ± 0.55
Epithalamus5.77 ± 0.32
Frontal Lobe5.3 ± 0.44
Globus Pallidus5.68 ± 0.47
Hypothalamus5.41 ± 0.29
Insula5.24 ± 0.37
Limbic Lobe5.32 ± 0.45
Mesencephalon5.51 ± 0.45
Myelencephalon5.44 ± 0.45
Occipital Lobe5.66 ± 0.46
Parietal Lobe5.49 ± 0.39
Pontine Tegmentum5.43 ± 0.44
Striatum5.67 ± 0.57
Subthalamus5.41 ± 0.24
Temporal Lobe5.29 ± 0.4
Thalamus5.5 ± 0.4
White Matter6.38 ± 0.1
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
5830415F09RikCBCerebellum33.08
40.45
5830415F09RikCTXCerebral cortex42.02
28.35
5830415F09RikHIPHippocampal region27.84
30.59
5830415F09RikHPFHippocampal formation32.6
30.37
5830415F09RikHYHypothalamus12.73
8.99
5830415F09RikLSXLateral septal complex3.94
2.6
5830415F09RikMBMidbrain20.94
17.32
5830415F09RikMYMedulla22.26
20.18
5830415F09RikOLFOlfactory bulb33.5
26.2
5830415F09RikPPons19.67
18.25
5830415F09RikPALPallidum13.35
10.31
5830415F09RikRHPRetrohippocampal region42.34
30.77
5830415F09RiksAMYStriatum-like amygdalar nuclei16.07
10.53
5830415F09RikSTRStriatum22.73
15.54
5830415F09RikSTRdStriatum dorsal region23.07
15.62
5830415F09RikSTRvStriatum ventral region32.06
22.09
5830415F09RikTHThalamus25.01
18.43
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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