Annotation Detail for RAB6B
Basic Information Top
| Gene Symbol: | RAB6B ( - ) |
|---|---|
| Gene Full Name: | RAB6B, member RAS oncogene family |
| Band: | 3q22.1 |
| Quick Links | Entrez ID:51560; OMIM: NA; Uniprot ID:RAB6B_HUMAN; ENSEMBL ID: ENSG00000154917; HGNC ID: 14902 |
| Relate to Another Database: | SFARIGene; denovo-db |
Unigene EST- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 210127_at
| Cell line | Expression level | Expression bar |
|---|---|---|
 | ||
| 721_B_lymphoblasts | 4.85 |  |
| Adipocyte | 3.9 | |
| AdrenalCortex | 4.1 | |
| Adrenalgland | 3.3 | |
| Amygdala | 4.15 | |
| Appendix | 3.9 | |
| AtrioventricularNode | 3 | |
| BDCA4+_DentriticCells | 4.45 | |
| Bonemarrow | 3.8 | |
| BronchialEpithelialCells | 3.85 | |
| CD105+_Endothelial | 3.95 | |
| CD14+_Monocytes | 4.2 | |
| CD19+_BCells(neg._sel.) | 4.15 | |
| CD33+_Myeloid | 5.05 | |
| CD34+ | 5 | |
| CD4+_Tcells | 4.2 | |
| CD56+_NKCells | 4.75 | |
| CD71+_EarlyErythroid | 44.95 |  |
| CD8+_Tcells | 3.75 | |
| CardiacMyocytes | 4.95 | |
| Caudatenucleus | 3.5 | |
| Cerebellum | 3.15 | |
| CerebellumPeduncles | 4.4 | |
| CiliaryGanglion | 2.8 | |
| CingulateCortex | 3.95 | |
| Colorectaladenocarcinoma | 3.95 | |
| DorsalRootGanglion | 3 | |
| FetalThyroid | 3.8 | |
| Fetalbrain | 3.85 | |
| Fetalliver | 3.35 | |
| Fetallung | 3.25 | |
| GlobusPallidus | 2.85 | |
| Heart | 5 | |
| Hypothalamus | 4.3 | |
| Kidney | 3.15 | |
| Leukemia_chronicMyelogenousK-562 | 3.55 | |
| Leukemia_promyelocytic-HL-60 | 3.4 | |
| Leukemialymphoblastic(MOLT-4) | 3.1 | |
| Liver | 5.45 | |
| Lung | 4.35 | |
| Lymphnode | 3.35 | |
| Lymphoma_burkitts(Daudi) | 4.95 | |
| Lymphoma_burkitts(Raji) | 5.45 | |
| MedullaOblongata | 3.6 | |
| OccipitalLobe | 3.45 | |
| OlfactoryBulb | 3.1 | |
| Ovary | 2.55 | |
| Pancreas | 3.2 | |
| PancreaticIslet | 4.2 | |
| ParietalLobe | 4.15 | |
| Pituitary | 4.55 | |
| Placenta | 4.1 | |
| Pons | 3.7 | |
| PrefrontalCortex | 4.85 | |
| Prostate | 4.55 | |
| Salivarygland | 3.1 | |
| SkeletalMuscle | 4.55 | |
| Skin | 3.1 | |
| SmoothMuscle | 4.45 | |
| Spinalcord | 4.15 | |
| SubthalamicNucleus | 3.55 | |
| SuperiorCervicalGanglion | 4.35 | |
| TemporalLobe | 3.6 | |
| Testis | 3.35 | |
| TestisGermCell | 3.3 | |
| TestisIntersitial | 3.25 | |
| TestisLeydigCell | 3.85 | |
| TestisSeminiferousTubule | 3.35 | |
| Thalamus | 3.9 | |
| Thymus | 3.1 | |
| Thyroid | 4.9 | |
| Tongue | 3.9 | |
| Tonsil | 3.8 | |
| Trachea | 3.25 | |
| TrigeminalGanglion | 4.05 | |
| Uterus | 3.15 | |
| UterusCorpus | 3.5 | |
| WholeBlood | 4.3 | |
| Wholebrain | 3.85 | |
| colon | 3.9 | |
| pineal_day | 4.86 | |
| pineal_night | 4.76 | |
| retina | 4.75 | |
| small_intestine | 3.75 | |
- Probe name: A_23_P109974
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 9.02 ± 0.77 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 8.6 ± 0.43 | |
| Basal Part of Pons | 9.85 ± 0.47 | |
| Cerebellar Cortex | 8.71 ± 0.3 | |
| Cerebellar Nuclei | 9 ± 0.89 | |
| Claustrum | 9.03 ± 0.71 | |
| Epithalamus | 7.83 ± 0.66 | |
| Frontal Lobe | 9.32 ± 0.64 | |
| Globus Pallidus | 8.44 ± 0.72 | |
| Hypothalamus | 8.58 ± 0.63 | |
| Insula | 9.5 ± 0.35 | |
| Limbic Lobe | 9.36 ± 0.57 | |
| Mesencephalon | 8.78 ± 0.58 | |
| Myelencephalon | 9.02 ± 0.72 | |
| Occipital Lobe | 9.09 ± 0.68 | |
| Parietal Lobe | 9.34 ± 0.64 | |
| Pontine Tegmentum | 9.07 ± 0.71 | |
| Striatum | 8.29 ± 0.9 | |
| Subthalamus | 8.97 ± 0.17 | |
| Temporal Lobe | 9.48 ± 0.46 | |
| Thalamus | 9.26 ± 0.55 | |
| White Matter | 6.76 ± 0.94 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Rab6b | CB | Cerebellum | 100 |  |
| 100 | | |||
| Rab6b | CTX | Cerebral cortex | 100 | |
| 100 | | |||
| Rab6b | HIP | Hippocampal region | 100 | |
| 100 | | |||
| Rab6b | HPF | Hippocampal formation | 100 | |
| 100 | | |||
| Rab6b | HY | Hypothalamus | 100 | |
| 100 | | |||
| Rab6b | LSX | Lateral septal complex | 100 | |
| 100 | | |||
| Rab6b | MB | Midbrain | 100 | |
| 100 | | |||
| Rab6b | MY | Medulla | 100 | |
| 100 | | |||
| Rab6b | OLF | Olfactory bulb | 100 | |
| 100 | | |||
| Rab6b | P | Pons | 100 | |
| 100 | | |||
| Rab6b | PAL | Pallidum | 100 | |
| 100 | | |||
| Rab6b | RHP | Retrohippocampal region | 100 | |
| 100 | | |||
| Rab6b | sAMY | Striatum-like amygdalar nuclei | 100 | |
| 100 | | |||
| Rab6b | STR | Striatum | 100 | |
| 100 | | |||
| Rab6b | STRd | Striatum dorsal region | 100 | |
| 100 | | |||
| Rab6b | STRv | Striatum ventral region | 100 | |
| 100 | | |||
| Rab6b | TH | Thalamus | 100 | |
| 100 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00040294 | 21 | 33 | 53 | FMYDSFDNTYQATIGIDFLSK | Peptide Atlas |
| RAB6B_HUMAN_115 | 12 | 115 | 126 | GSDVIIMLVGNK | PRIDE |
| RAB6B_HUMAN_115 | 19 | 115 | 133 | GSDVIIMLVGNKTDLADKR | PRIDE |
| RAB6B_HUMAN_13 | 13 | 13 | 25 | FKLVFLGEQSVGK | PRIDE |
| RAB6B_HUMAN_144 | 14 | 144 | 157 | AKELSVMFIETSAK | PRIDE |
| RAB6B_HUMAN_146 | 12 | 146 | 157 | ELSVMFIETSAK | PRIDE |
| RAB6B_HUMAN_15 | 11 | 15 | 25 | LVFLGEQSVGK | PRIDE |
| RAB6B_HUMAN_169 | 14 | 169 | 182 | VASALPGMENVQEK | PRIDE |
| RAB6B_HUMAN_63 | 11 | 63 | 73 | LQLWDTAGQER | PRIDE |
| RAB6B_HUMAN_84 | 22 | 84 | 105 | DSTVAVVVYDITNLNSFQQTSK | PRIDE |