AutismKB 2.0

Annotation Detail for NBAS


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Basic Information Top
Gene Symbol:NBAS ( DKFZp586G1219,FLJ40407,NAG )
Gene Full Name: neuroblastoma amplified sequence
Band: 2p24.3
Quick LinksEntrez ID:51594; OMIM: 608025; Uniprot ID:NBAS_HUMAN; ENSEMBL ID: ENSG00000151779; HGNC ID: 15625
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body8 / 70761113
blastocyst4 / 6231964
fetus39 / 56401269
neonate1 / 3109732
infant0 / 236200 
juvenile0 / 555560 
adult148 / 193912176
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor12 / 94178127
cervical tumor1 / 3436629
chondrosarcoma7 / 8282384
colorectal tumor11 / 11424696
esophageal tumor0 / 172900 
gastrointestinal tumor4 / 11936933
germ cell tumor2 / 2638457
glioma4 / 10688337
head and neck tumor6 / 13630244
kidney tumor5 / 6895972
leukemia0 / 958420 
liver tumor2 / 9635920
lung tumor7 / 10312767
lymphoma0 / 717550 
non-neoplasia1 / 9725010
normal136 / 336030740
ovarian tumor2 / 7668226
pancreatic tumor5 / 10461647
primitive neuroectodermal tumor of the CNS24 / 125680190
prostate cancer9 / 10268087
retinoblastoma30 / 46356647
skin tumor5 / 12494940
soft tissue/muscle tissue tumor57 / 125191455
uterine tumor3 / 9025733
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone3 / 7165541
bone marrow1 / 4880120
brain37 / 110098933
cervix2 / 4817141
connective tissue60 / 149255401
ear1 / 1621261
embryonic tissue15 / 21572269
esophagus0 / 202090 
eye43 / 211054203
heart5 / 8962655
intestine14 / 23447259
kidney8 / 21177737
larynx1 / 2414541
liver3 / 20774314
lung13 / 33697438
lymph0 / 442700 
lymph node11 / 91610120
mammary gland20 / 153271130
mouth1 / 6705214
muscle1 / 1077159
nerve0 / 157680 
ovary2 / 10205119
pancreas5 / 21481223
parathyroid0 / 205390 
pharynx1 / 4132824
pituitary gland1 / 1658560
placenta6 / 28082521
prostate14 / 18934573
salivary gland0 / 201550 
skin6 / 21057428
spleen1 / 5395218
stomach3 / 9661931
testis11 / 33044233
thymus0 / 811310 
thyroid5 / 47473105
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord1 / 1368073
uterus8 / 23287834
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 202926_at
Cell line Expression level Expression bar
721_B_lymphoblasts80
Adipocyte33.2
AdrenalCortex35.4
Adrenalgland28.85
Amygdala64.3
Appendix33.15
AtrioventricularNode26.25
BDCA4+_DentriticCells50.1
Bonemarrow34.1
BronchialEpithelialCells39.65
CD105+_Endothelial189.6
CD14+_Monocytes37.2
CD19+_BCells(neg._sel.)39.65
CD33+_Myeloid45.95
CD34+89.2
CD4+_Tcells79
CD56+_NKCells49.95
CD71+_EarlyErythroid107
CD8+_Tcells63.55
CardiacMyocytes39.55
Caudatenucleus31.9
Cerebellum26.2
CerebellumPeduncles39.35
CiliaryGanglion23.65
CingulateCortex38.85
Colorectaladenocarcinoma59.35
DorsalRootGanglion26.1
FetalThyroid34.6
Fetalbrain47.6
Fetalliver41.35
Fetallung25.35
GlobusPallidus24.35
Heart45.4
Hypothalamus57.3
Kidney28.4
Leukemia_chronicMyelogenousK-562139.75
Leukemia_promyelocytic-HL-6029.05
Leukemialymphoblastic(MOLT-4)29.25
Liver43.6
Lung37.6
Lymphnode26.45
Lymphoma_burkitts(Daudi)39.75
Lymphoma_burkitts(Raji)65.6
MedullaOblongata32.7
OccipitalLobe32.35
OlfactoryBulb27.65
Ovary21.55
Pancreas27.15
PancreaticIslet36.65
ParietalLobe37.3
Pituitary55.6
Placenta31.2
Pons30.3
PrefrontalCortex108.85
Prostate54
Salivarygland26.35
SkeletalMuscle39.75
Skin25.8
SmoothMuscle41.05
Spinalcord42.25
SubthalamicNucleus30.85
SuperiorCervicalGanglion35.85
TemporalLobe29.3
Testis62.65
TestisGermCell152.15
TestisIntersitial72
TestisLeydigCell35.55
TestisSeminiferousTubule80.9
Thalamus40.5
Thymus25.4
Thyroid72.5
Tongue34.45
Tonsil30.75
Trachea26.35
TrigeminalGanglion33.75
Uterus115.95
UterusCorpus45.2
WholeBlood32.5
Wholebrain59.6
colon36.9
pineal_day52.98
pineal_night60.68
retina42.55
small_intestine44.5
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P90752
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala5.81 ± 0.8
Basal Forebrain6.08 ± 0.33
Basal Part of Pons6.49 ± 0.39
Cerebellar Cortex6.21 ± 0.4
Cerebellar Nuclei5.89 ± 0.38
Claustrum5.73 ± 0.64
Epithalamus6.25 ± 0.4
Frontal Lobe6.31 ± 0.4
Globus Pallidus5.46 ± 0.16
Hypothalamus6.53 ± 0.35
Insula6.41 ± 0.33
Limbic Lobe5.96 ± 0.55
Mesencephalon6.12 ± 0.52
Myelencephalon6.07 ± 0.56
Occipital Lobe5.59 ± 0.65
Parietal Lobe6.13 ± 0.47
Pontine Tegmentum6.04 ± 0.59
Striatum5.81 ± 0.58
Subthalamus6.31 ± 0.52
Temporal Lobe6.34 ± 0.42
Thalamus6.07 ± 0.47
White Matter5.58 ± 0.34
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
4933425L03RikCBCerebellum9.73
8.79
4933425L03RikCTXCerebral cortex4.76
3.11
4933425L03RikHIPHippocampal region8.85
7.59
4933425L03RikHPFHippocampal formation7.43
5.77
4933425L03RikHYHypothalamus7.26
4.74
4933425L03RikLSXLateral septal complex4.68
2.77
4933425L03RikMBMidbrain10.38
8.07
4933425L03RikMYMedulla5.84
6.31
4933425L03RikOLFOlfactory bulb13.76
10.55
4933425L03RikPPons9.59
9.39
4933425L03RikPALPallidum8.11
5.76
4933425L03RikRHPRetrohippocampal region4.97
3.26
4933425L03RiksAMYStriatum-like amygdalar nuclei3.72
2.32
4933425L03RikSTRStriatum5.23
3.42
4933425L03RikSTRdStriatum dorsal region5.72
4
4933425L03RikSTRvStriatum ventral region4.91
2.71
4933425L03RikTHThalamus7.85
5.59
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00041480 20 1033 1052 LHDMVDQLEQILSVSELLEK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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