AutismKB 2.0

Annotation Detail for LUC7L2


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Basic Information Top
Gene Symbol:LUC7L2 ( CGI-74,FLJ10657,LUC7B2,hLuc7B2 )
Gene Full Name: LUC7-like 2 (S. cerevisiae)
Band: 7q34
Quick LinksEntrez ID:51631; OMIM: 613056; Uniprot ID:LC7L2_HUMAN; ENSEMBL ID: ENSG00000146963; HGNC ID: 21608
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body9 / 70761127
blastocyst4 / 6231964
fetus39 / 56401269
neonate3 / 3109796
infant1 / 2362042
juvenile2 / 5555635
adult178 / 193912191
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor2 / 12794156
bladder carcinoma1 / 1747557
breast (mammary gland) tumor5 / 9417853
cervical tumor2 / 3436658
chondrosarcoma10 / 82823120
colorectal tumor9 / 11424678
esophageal tumor2 / 17290115
gastrointestinal tumor6 / 11936950
germ cell tumor26 / 26384598
glioma8 / 10688374
head and neck tumor17 / 136302124
kidney tumor9 / 68959130
leukemia7 / 9584273
liver tumor8 / 9635983
lung tumor3 / 10312729
lymphoma3 / 7175541
non-neoplasia8 / 9725082
normal314 / 336030793
ovarian tumor2 / 7668226
pancreatic tumor7 / 10461666
primitive neuroectodermal tumor of the CNS12 / 12568095
prostate cancer11 / 102680107
retinoblastoma4 / 4635686
skin tumor5 / 12494940
soft tissue/muscle tissue tumor4 / 12519131
uterine tumor4 / 9025744
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland3 / 3319790
ascites3 / 4001574
bladder7 / 29757235
blood7 / 12347856
bone10 / 71655139
bone marrow6 / 48801122
brain106 / 110098996
cervix2 / 4817141
connective tissue11 / 14925573
ear1 / 1621261
embryonic tissue27 / 215722125
esophagus3 / 20209148
eye15 / 21105471
heart7 / 8962678
intestine18 / 23447276
kidney22 / 211777103
larynx1 / 2414541
liver9 / 20774343
lung24 / 33697471
lymph3 / 4427067
lymph node7 / 9161076
mammary gland16 / 153271104
mouth8 / 67052119
muscle3 / 10771527
nerve3 / 15768190
ovary4 / 10205139
pancreas18 / 21481283
parathyroid1 / 2053948
pharynx1 / 4132824
pituitary gland1 / 1658560
placenta28 / 28082599
prostate23 / 189345121
salivary gland0 / 201550 
skin11 / 21057452
spleen8 / 53952148
stomach8 / 9661982
testis40 / 330442121
thymus7 / 8113186
thyroid8 / 47473168
tonsil0 / 169990 
trachea14 / 52413267
umbilical cord1 / 1368073
uterus22 / 23287894
vascular6 / 51780115
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 217842_at
Cell line Expression level Expression bar
721_B_lymphoblasts26.55
Adipocyte12.65
AdrenalCortex15.55
Adrenalgland10.95
Amygdala18.35
Appendix14.4
AtrioventricularNode12.65
BDCA4+_DentriticCells28.05
Bonemarrow13.85
BronchialEpithelialCells16.4
CD105+_Endothelial35.65
CD14+_Monocytes16.05
CD19+_BCells(neg._sel.)17.2
CD33+_Myeloid19.25
CD34+46.4
CD4+_Tcells48.15
CD56+_NKCells49
CD71+_EarlyErythroid14.85
CD8+_Tcells50.25
CardiacMyocytes19.45
Caudatenucleus13.3
Cerebellum10.55
CerebellumPeduncles16.85
CiliaryGanglion10.45
CingulateCortex15.15
Colorectaladenocarcinoma12.5
DorsalRootGanglion11.2
FetalThyroid18.05
Fetalbrain14.15
Fetalliver11.9
Fetallung13.6
GlobusPallidus11.1
Heart17.65
Hypothalamus22.6
Kidney11.25
Leukemia_chronicMyelogenousK-56216.15
Leukemia_promyelocytic-HL-6013.3
Leukemialymphoblastic(MOLT-4)51.15
Liver18.7
Lung15.7
Lymphnode12.7
Lymphoma_burkitts(Daudi)22.15
Lymphoma_burkitts(Raji)21.85
MedullaOblongata11.45
OccipitalLobe12.9
OlfactoryBulb14.7
Ovary9.7
Pancreas11.9
PancreaticIslet16.05
ParietalLobe16
Pituitary14.15
Placenta14.5
Pons14
PrefrontalCortex37.85
Prostate19.5
Salivarygland12.1
SkeletalMuscle17.45
Skin14.25
SmoothMuscle13.5
Spinalcord38.05
SubthalamicNucleus16.5
SuperiorCervicalGanglion16.8
TemporalLobe13.45
Testis13.1
TestisGermCell12.25
TestisIntersitial15.65
TestisLeydigCell14.4
TestisSeminiferousTubule12.85
Thalamus15.25
Thymus12
Thyroid42.75
Tongue15.05
Tonsil11.75
Trachea11.5
TrigeminalGanglion17.9
Uterus32.2
UterusCorpus13.15
WholeBlood14.8
Wholebrain11.95
colon15.05
pineal_day44.74
pineal_night37.68
retina18.35
small_intestine14.4
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P59791
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala7.56 ± 0.35
Basal Forebrain7.81 ± 0.09
Basal Part of Pons7.95 ± 0.15
Cerebellar Cortex7.95 ± 0.15
Cerebellar Nuclei7.78 ± 0.19
Claustrum7.62 ± 0.36
Epithalamus7.94 ± 0.17
Frontal Lobe7.85 ± 0.24
Globus Pallidus8.05 ± 0.16
Hypothalamus7.84 ± 0.21
Insula7.83 ± 0.28
Limbic Lobe7.76 ± 0.24
Mesencephalon7.76 ± 0.3
Myelencephalon7.81 ± 0.25
Occipital Lobe7.91 ± 0.25
Parietal Lobe7.86 ± 0.28
Pontine Tegmentum7.81 ± 0.24
Striatum7.6 ± 0.21
Subthalamus7.95 ± 0.13
Temporal Lobe7.86 ± 0.22
Thalamus7.87 ± 0.28
White Matter8.59 ± 0.19
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Luc7l2CBCerebellum100
100
Luc7l2CTXCerebral cortex100
100
Luc7l2HIPHippocampal region100
100
Luc7l2HPFHippocampal formation100
100
Luc7l2HYHypothalamus100
100
Luc7l2LSXLateral septal complex100
100
Luc7l2MBMidbrain100
100
Luc7l2MYMedulla100
100
Luc7l2OLFOlfactory bulb100
100
Luc7l2PPons100
100
Luc7l2PALPallidum100
100
Luc7l2RHPRetrohippocampal region100
100
Luc7l2sAMYStriatum-like amygdalar nuclei100
100
Luc7l2STRStriatum100
100
Luc7l2STRdStriatum dorsal region100
100
Luc7l2STRvStriatum ventral region100
100
Luc7l2THThalamus100
100
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
LC7L2_HUMAN_0 0 0 0 VEQLGAEGNVEESQK PRIDE
LC7L2_HUMAN_139 15 139 153 VEQLGAEGNVEESQK PRIDE
PAp00006702 16 107 122 RLAETQEEISAEVAAK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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