AutismKB 2.0

Annotation Detail for UIMC1


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Basic Information Top
Gene Symbol:UIMC1 ( RAP80,X2HRIP110 )
Gene Full Name: ubiquitin interaction motif containing 1
Band: 5q35.2
Quick LinksEntrez ID:51720; OMIM: 609433; Uniprot ID:UIMC1_HUMAN; ENSEMBL ID: ENSG00000087206; HGNC ID: 30298
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body2 / 7076128
blastocyst2 / 6231932
fetus29 / 56401251
neonate1 / 3109732
infant0 / 236200 
juvenile6 / 55556107
adult82 / 193912142
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor4 / 9417842
cervical tumor2 / 3436658
chondrosarcoma7 / 8282384
colorectal tumor5 / 11424643
esophageal tumor1 / 1729057
gastrointestinal tumor15 / 119369125
germ cell tumor16 / 26384560
glioma2 / 10688318
head and neck tumor4 / 13630229
kidney tumor2 / 6895929
leukemia4 / 9584241
liver tumor8 / 9635983
lung tumor1 / 1031279
lymphoma11 / 71755153
non-neoplasia0 / 972500 
normal149 / 336030744
ovarian tumor6 / 7668278
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS3 / 12568023
prostate cancer1 / 1026809
retinoblastoma1 / 4635621
skin tumor3 / 12494924
soft tissue/muscle tissue tumor1 / 1251917
uterine tumor8 / 9025788
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland1 / 3319730
ascites3 / 4001574
bladder0 / 297570 
blood13 / 123478105
bone7 / 7165597
bone marrow0 / 488010 
brain24 / 110098921
cervix6 / 48171124
connective tissue3 / 14925520
ear0 / 162120 
embryonic tissue7 / 21572232
esophagus1 / 2020949
eye9 / 21105442
heart7 / 8962678
intestine8 / 23447234
kidney12 / 21177756
larynx0 / 241450 
liver10 / 20774348
lung7 / 33697420
lymph8 / 44270180
lymph node7 / 9161076
mammary gland5 / 15327132
mouth3 / 6705244
muscle3 / 10771527
nerve0 / 157680 
ovary6 / 10205158
pancreas6 / 21481227
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta12 / 28082542
prostate1 / 1893455
salivary gland0 / 201550 
skin3 / 21057414
spleen2 / 5395237
stomach12 / 96619124
testis23 / 33044269
thymus3 / 8113136
thyroid2 / 4747342
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord1 / 1368073
uterus14 / 23287860
vascular3 / 5178057
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 220746_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts114.55
Adipocyte10.85
AdrenalCortex13.7
Adrenalgland10.15
Amygdala11.35
Appendix15.1
AtrioventricularNode10.3
BDCA4+_DentriticCells65.45
Bonemarrow15.3
BronchialEpithelialCells15.4
CD105+_Endothelial60.5
CD14+_Monocytes56.8
CD19+_BCells(neg._sel.)157.4
CD33+_Myeloid67.85
CD34+62.3
CD4+_Tcells100.3
CD56+_NKCells97.05
CD71+_EarlyErythroid171.6
CD8+_Tcells90
CardiacMyocytes15.9
Caudatenucleus10.85
Cerebellum10.25
CerebellumPeduncles14
CiliaryGanglion8.75
CingulateCortex12.7
Colorectaladenocarcinoma19.25
DorsalRootGanglion10.1
FetalThyroid18.45
Fetalbrain30.2
Fetalliver10.45
Fetallung18.75
GlobusPallidus9.2
Heart13.3
Hypothalamus14.05
Kidney9.9
Leukemia_chronicMyelogenousK-56241.1
Leukemia_promyelocytic-HL-6062.95
Leukemialymphoblastic(MOLT-4)21.05
Liver15.95
Lung13.8
Lymphnode23.05
Lymphoma_burkitts(Daudi)91.7
Lymphoma_burkitts(Raji)31.75
MedullaOblongata14.15
OccipitalLobe11.3
OlfactoryBulb17.7
Ovary11.25
Pancreas9.85
PancreaticIslet13.65
ParietalLobe12.9
Pituitary15.15
Placenta12.7
Pons11.9
PrefrontalCortex15.85
Prostate15.2
Salivarygland10.15
SkeletalMuscle15.2
Skin16
SmoothMuscle20.9
Spinalcord15.5
SubthalamicNucleus11.35
SuperiorCervicalGanglion16.95
TemporalLobe8.7
Testis55.5
TestisGermCell108.25
TestisIntersitial93.15
TestisLeydigCell71.6
TestisSeminiferousTubule102.25
Thalamus9.9
Thymus16.4
Thyroid16.45
Tongue12.65
Tonsil29.35
Trachea10.85
TrigeminalGanglion12.3
Uterus23.75
UterusCorpus16.6
WholeBlood38.6
Wholebrain10.95
colon9.55
pineal_day16.74
pineal_night16.14
retina16.3
small_intestine11.7
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_15740_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala5.04 ± 0.49
Basal Forebrain5.11 ± 0.16
Basal Part of Pons5.06 ± 0.48
Cerebellar Cortex5.48 ± 0.23
Cerebellar Nuclei4.82 ± 0.42
Claustrum4.89 ± 0.53
Epithalamus5.51 ± 0.33
Frontal Lobe4.96 ± 0.37
Globus Pallidus5.17 ± 0.4
Hypothalamus4.87 ± 0.68
Insula4.82 ± 0.36
Limbic Lobe5.09 ± 0.41
Mesencephalon5.02 ± 0.54
Myelencephalon5.07 ± 0.43
Occipital Lobe5.52 ± 0.47
Parietal Lobe5.06 ± 0.36
Pontine Tegmentum5.11 ± 0.41
Striatum5.01 ± 0.52
Subthalamus4.87 ± 0.15
Temporal Lobe5.09 ± 0.41
Thalamus4.98 ± 0.37
White Matter5.54 ± 0.35
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Rxrip110CBCerebellum16.63
16.62
Rxrip110CTXCerebral cortex38.92
25.71
Rxrip110HIPHippocampal region34.48
32.9
Rxrip110HPFHippocampal formation43.98
38.8
Rxrip110HYHypothalamus7.53
5.47
Rxrip110LSXLateral septal complex4.87
3.15
Rxrip110MBMidbrain14.14
11.73
Rxrip110MYMedulla20.01
18.85
Rxrip110OLFOlfactory bulb28.98
20.34
Rxrip110PPons16.13
15.28
Rxrip110PALPallidum10.38
8.35
Rxrip110RHPRetrohippocampal region61.19
48.11
Rxrip110sAMYStriatum-like amygdalar nuclei19.65
12.62
Rxrip110STRStriatum8.82
5.87
Rxrip110STRdStriatum dorsal region8.22
5.72
Rxrip110STRvStriatum ventral region6.39
3.86
Rxrip110THThalamus9.18
7.32
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00003245 10 256 265 HCLPTLADAK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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