AutismKB 2.0

Annotation Detail for PEG3


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Basic Information Top
Gene Symbol:PEG3 ( DKFZp781A095,KIAA0287,PW1,ZNF904,ZSCAN24 )
Gene Full Name: paternally expressed 3
Band: 19q13.4
Quick LinksEntrez ID:5178; OMIM: 601483; Uniprot ID:PEG3_HUMAN; ENSEMBL ID: ENSG00000198300; HGNC ID: 8826
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body7 / 7076198
blastocyst0 / 623190 
fetus41 / 56401272
neonate0 / 310970 
infant2 / 2362084
juvenile6 / 55556107
adult108 / 193912155
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor5 / 12794390
bladder carcinoma0 / 174750 
breast (mammary gland) tumor5 / 9417853
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor1 / 1193698
germ cell tumor19 / 26384572
glioma0 / 1068830 
head and neck tumor3 / 13630222
kidney tumor6 / 6895987
leukemia0 / 958420 
liver tumor9 / 9635993
lung tumor1 / 1031279
lymphoma0 / 717550 
non-neoplasia2 / 9725020
normal206 / 336030761
ovarian tumor3 / 7668239
pancreatic tumor3 / 10461628
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer10 / 10268097
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor3 / 12519123
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland12 / 33197361
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone0 / 716550 
bone marrow0 / 488010 
brain67 / 110098960
cervix0 / 481710 
connective tissue0 / 1492550 
ear2 / 16212123
embryonic tissue13 / 21572260
esophagus0 / 202090 
eye10 / 21105447
heart2 / 8962622
intestine0 / 2344720 
kidney8 / 21177737
larynx0 / 241450 
liver9 / 20774343
lung2 / 3369745
lymph0 / 442700 
lymph node0 / 916100 
mammary gland5 / 15327132
mouth4 / 6705259
muscle8 / 10771574
nerve0 / 157680 
ovary5 / 10205148
pancreas11 / 21481251
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland7 / 16585422
placenta44 / 280825156
prostate10 / 18934552
salivary gland0 / 201550 
skin0 / 2105740 
spleen0 / 539520 
stomach1 / 9661910
testis29 / 33044287
thymus1 / 8113112
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus2 / 2328788
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 209243_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts7.85
Adipocyte7.55
AdrenalCortex105.25
Adrenalgland146.75
Amygdala230.15
Appendix9
AtrioventricularNode7.35
BDCA4+_DentriticCells7.55
Bonemarrow8.3
BronchialEpithelialCells7.25
CD105+_Endothelial8.05
CD14+_Monocytes8.6
CD19+_BCells(neg._sel.)8.25
CD33+_Myeloid8.85
CD34+9.1
CD4+_Tcells7.75
CD56+_NKCells8.2
CD71+_EarlyErythroid7.7
CD8+_Tcells6.35
CardiacMyocytes23.15
Caudatenucleus62.85
Cerebellum7.55
CerebellumPeduncles15.85
CiliaryGanglion6.5
CingulateCortex89.4
Colorectaladenocarcinoma7.75
DorsalRootGanglion6.9
FetalThyroid8.3
Fetalbrain8.25
Fetalliver261.7
Fetallung6.3
GlobusPallidus46.15
Heart11.75
Hypothalamus238.1
Kidney6.7
Leukemia_chronicMyelogenousK-5626.95
Leukemia_promyelocytic-HL-607
Leukemialymphoblastic(MOLT-4)5.45
Liver11.1
Lung8.65
Lymphnode6.15
Lymphoma_burkitts(Daudi)10.55
Lymphoma_burkitts(Raji)12.25
MedullaOblongata135.2
OccipitalLobe185.75
OlfactoryBulb6.3
Ovary53.4
Pancreas6.7
PancreaticIslet8.9
ParietalLobe98.35
Pituitary335.8
Placenta98.3
Pons96.95
PrefrontalCortex113.75
Prostate9.25
Salivarygland6.7
SkeletalMuscle11.05
Skin6.95
SmoothMuscle8.85
Spinalcord9.95
SubthalamicNucleus55.4
SuperiorCervicalGanglion12.4
TemporalLobe73.45
Testis7.95
TestisGermCell40.75
TestisIntersitial13.75
TestisLeydigCell10
TestisSeminiferousTubule7.9
Thalamus15.6
Thymus5.8
Thyroid9.95
Tongue8.6
Tonsil8.25
Trachea6.4
TrigeminalGanglion10.3
Uterus36.6
UterusCorpus8.75
WholeBlood8.5
Wholebrain82
colon8.15
pineal_day14.42
pineal_night44.38
retina10.525
small_intestine7.55
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_508_PI416408490
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala7.22 ± 0.75
Basal Forebrain7.87 ± 0.3
Basal Part of Pons7.66 ± 0.31
Cerebellar Cortex7.06 ± 0.19
Cerebellar Nuclei6.6 ± 0.45
Claustrum6.87 ± 0.64
Epithalamus7.37 ± 0.68
Frontal Lobe7.45 ± 0.46
Globus Pallidus6.58 ± 0.57
Hypothalamus8.3 ± 0.42
Insula7.65 ± 0.27
Limbic Lobe7.28 ± 0.4
Mesencephalon7.39 ± 0.73
Myelencephalon7.45 ± 0.65
Occipital Lobe7.68 ± 0.41
Parietal Lobe7.53 ± 0.54
Pontine Tegmentum7.54 ± 0.66
Striatum8.49 ± 0.4
Subthalamus7.46 ± 0.88
Temporal Lobe7.5 ± 0.34
Thalamus7.7 ± 0.41
White Matter6.24 ± 0.72
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Peg3CBCerebellum100
100
Peg3CTXCerebral cortex100
100
Peg3HIPHippocampal region100
100
Peg3HPFHippocampal formation100
100
Peg3HYHypothalamus100
100
Peg3LSXLateral septal complex100
100
Peg3MBMidbrain100
100
Peg3MYMedulla100
100
Peg3OLFOlfactory bulb100
100
Peg3PPons100
100
Peg3PALPallidum100
100
Peg3RHPRetrohippocampal region100
100
Peg3sAMYStriatum-like amygdalar nuclei100
100
Peg3STRStriatum100
100
Peg3STRdStriatum dorsal region100
100
Peg3STRvStriatum ventral region100
100
Peg3THThalamus100
100
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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