AutismKB 2.0

Annotation Detail for PET112L


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Basic Information Top
Gene Symbol:PET112L ( PET112 )
Gene Full Name: PET112-like (yeast)
Band: 4q27-q28
Quick LinksEntrez ID:5188; OMIM: 603645; Uniprot ID:GATB_HUMAN; ENSEMBL ID: ENSG00000059691; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body2 / 7076128
blastocyst2 / 6231932
fetus10 / 56401217
neonate2 / 3109764
infant0 / 236200 
juvenile7 / 55556125
adult83 / 193912142
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma1 / 1747557
breast (mammary gland) tumor0 / 941780 
cervical tumor2 / 3436658
chondrosarcoma3 / 8282336
colorectal tumor2 / 11424617
esophageal tumor1 / 1729057
gastrointestinal tumor4 / 11936933
germ cell tumor14 / 26384553
glioma6 / 10688356
head and neck tumor2 / 13630214
kidney tumor2 / 6895929
leukemia3 / 9584231
liver tumor4 / 9635941
lung tumor3 / 10312729
lymphoma1 / 7175513
non-neoplasia10 / 97250102
normal166 / 336030749
ovarian tumor2 / 7668226
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS18 / 125680143
prostate cancer0 / 1026800 
retinoblastoma2 / 4635643
skin tumor4 / 12494932
soft tissue/muscle tissue tumor3 / 12519123
uterine tumor3 / 9025733
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue2 / 13106152
adrenal gland1 / 3319730
ascites2 / 4001549
bladder1 / 2975733
blood7 / 12347856
bone4 / 7165555
bone marrow2 / 4880140
brain69 / 110098962
cervix2 / 4817141
connective tissue7 / 14925546
ear0 / 162120 
embryonic tissue9 / 21572241
esophagus1 / 2020949
eye14 / 21105466
heart6 / 8962666
intestine8 / 23447234
kidney23 / 211777108
larynx0 / 241450 
liver7 / 20774333
lung8 / 33697423
lymph1 / 4427022
lymph node0 / 916100 
mammary gland0 / 1532710 
mouth1 / 6705214
muscle3 / 10771527
nerve0 / 157680 
ovary6 / 10205158
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx1 / 4132824
pituitary gland0 / 165850 
placenta6 / 28082521
prostate4 / 18934521
salivary gland0 / 201550 
skin4 / 21057418
spleen1 / 5395218
stomach4 / 9661941
testis15 / 33044245
thymus3 / 8113136
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord1 / 1368073
uterus14 / 23287860
vascular5 / 5178096
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 204300_at
Cell line Expression level Expression bar
721_B_lymphoblasts8.35
Adipocyte5.75
AdrenalCortex7
Adrenalgland5.15
Amygdala5.9
Appendix6
AtrioventricularNode4.75
BDCA4+_DentriticCells6.5
Bonemarrow6.35
BronchialEpithelialCells5.6
CD105+_Endothelial6.85
CD14+_Monocytes6.35
CD19+_BCells(neg._sel.)9.05
CD33+_Myeloid7.35
CD34+12.15
CD4+_Tcells6.4
CD56+_NKCells7.15
CD71+_EarlyErythroid5.8
CD8+_Tcells5.65
CardiacMyocytes8
Caudatenucleus8.05
Cerebellum4.75
CerebellumPeduncles6.9
CiliaryGanglion4.45
CingulateCortex10.1
Colorectaladenocarcinoma5.7
DorsalRootGanglion4.75
FetalThyroid6.25
Fetalbrain5.85
Fetalliver5.15
Fetallung4.5
GlobusPallidus4.6
Heart31.6
Hypothalamus9.15
Kidney5.1
Leukemia_chronicMyelogenousK-5625.45
Leukemia_promyelocytic-HL-605.8
Leukemialymphoblastic(MOLT-4)4.7
Liver8.4
Lung6.3
Lymphnode4.9
Lymphoma_burkitts(Daudi)7.65
Lymphoma_burkitts(Raji)8.3
MedullaOblongata6.5
OccipitalLobe5.4
OlfactoryBulb10.05
Ovary4
Pancreas4.6
PancreaticIslet6.25
ParietalLobe6.6
Pituitary7.25
Placenta6
Pons5.7
PrefrontalCortex11.9
Prostate6.6
Salivarygland4.7
SkeletalMuscle8
Skin4.75
SmoothMuscle6.15
Spinalcord17.85
SubthalamicNucleus7.05
SuperiorCervicalGanglion7
TemporalLobe8.4
Testis5.05
TestisGermCell4.7
TestisIntersitial4.95
TestisLeydigCell6
TestisSeminiferousTubule5
Thalamus8.05
Thymus4.35
Thyroid6.8
Tongue6.7
Tonsil5.8
Trachea4.7
TrigeminalGanglion6.8
Uterus4.25
UterusCorpus5.25
WholeBlood6.15
Wholebrain11.6
colon5.45
pineal_day7.46
pineal_night7.28
retina8.625
small_intestine5.65
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_6666_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala5.47 ± 0.32
Basal Forebrain5.38 ± 0.4
Basal Part of Pons5.48 ± 0.26
Cerebellar Cortex5.09 ± 0.32
Cerebellar Nuclei5.5 ± 0.66
Claustrum5.98 ± 0.37
Epithalamus5.09 ± 0.53
Frontal Lobe5.3 ± 0.43
Globus Pallidus5.99 ± 0.29
Hypothalamus5.32 ± 0.57
Insula5.18 ± 0.41
Limbic Lobe5.41 ± 0.47
Mesencephalon5.36 ± 0.53
Myelencephalon5.37 ± 0.48
Occipital Lobe5.59 ± 0.32
Parietal Lobe5.51 ± 0.49
Pontine Tegmentum5.4 ± 0.53
Striatum5.63 ± 0.43
Subthalamus5.03 ± 0.19
Temporal Lobe5.31 ± 0.44
Thalamus5.32 ± 0.34
White Matter6.11 ± 0.57
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Pet112lCBCerebellum9.69
10.74
Pet112lCTXCerebral cortex21.69
15.41
Pet112lHIPHippocampal region20.51
21.89
Pet112lHPFHippocampal formation20.8
19.43
Pet112lHYHypothalamus2.62
2.62
Pet112lLSXLateral septal complex2.13
1.41
Pet112lMBMidbrain5.1
5.03
Pet112lMYMedulla6.16
6.89
Pet112lOLFOlfactory bulb21.01
17.55
Pet112lPPons5.87
6.7
Pet112lPALPallidum4.99
4.35
Pet112lRHPRetrohippocampal region21.73
16.28
Pet112lsAMYStriatum-like amygdalar nuclei7.67
5.09
Pet112lSTRStriatum9.37
6.81
Pet112lSTRdStriatum dorsal region9.93
7.53
Pet112lSTRvStriatum ventral region12.6
8.31
Pet112lTHThalamus6.64
5.94
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
GATB_HUMAN_42 16 42 57 ESSVAQQPLHTAQKTR PRIDE
PAp00069932 17 140 156 HYFYADLPAGYQITQQR Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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