AutismKB 2.0

Annotation Detail for PEX7


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Basic Information Top
Gene Symbol:PEX7 ( PTS2R,RCDP1,RD )
Gene Full Name: peroxisomal biogenesis factor 7
Band: 6q23.3
Quick LinksEntrez ID:5191; OMIM: 601757; Uniprot ID:PEX7_HUMAN; ENSEMBL ID: ENSG00000112357; HGNC ID: 8860
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body1 / 7076114
blastocyst1 / 6231916
fetus7 / 56401212
neonate2 / 3109764
infant0 / 236200 
juvenile0 / 555560 
adult34 / 193912117
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor1 / 9417810
cervical tumor0 / 343660 
chondrosarcoma1 / 8282312
colorectal tumor2 / 11424617
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor1 / 2638453
glioma1 / 1068839
head and neck tumor1 / 1363027
kidney tumor0 / 689590 
leukemia2 / 9584220
liver tumor2 / 9635920
lung tumor3 / 10312729
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal40 / 336030711
ovarian tumor2 / 7668226
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS1 / 1256807
prostate cancer1 / 1026809
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor9 / 12519171
uterine tumor2 / 9025722
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland1 / 3319730
ascites0 / 400150 
bladder0 / 297570 
blood2 / 12347816
bone1 / 7165513
bone marrow0 / 488010 
brain4 / 11009893
cervix0 / 481710 
connective tissue9 / 14925560
ear0 / 162120 
embryonic tissue3 / 21572213
esophagus0 / 202090 
eye2 / 2110549
heart0 / 896260 
intestine8 / 23447234
kidney1 / 2117774
larynx0 / 241450 
liver2 / 2077439
lung9 / 33697426
lymph0 / 442700 
lymph node0 / 916100 
mammary gland1 / 1532716
mouth1 / 6705214
muscle0 / 1077150 
nerve0 / 157680 
ovary2 / 10205119
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta6 / 28082521
prostate1 / 1893455
salivary gland0 / 201550 
skin2 / 2105749
spleen1 / 5395218
stomach0 / 966190 
testis4 / 33044212
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord2 / 13680146
uterus5 / 23287821
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 211033_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts6
Adipocyte4
AdrenalCortex4.15
Adrenalgland3.35
Amygdala6.55
Appendix4
AtrioventricularNode2.95
BDCA4+_DentriticCells4.45
Bonemarrow3.9
BronchialEpithelialCells6.1
CD105+_Endothelial5.9
CD14+_Monocytes4.3
CD19+_BCells(neg._sel.)4.35
CD33+_Myeloid4.9
CD34+6.25
CD4+_Tcells4.35
CD56+_NKCells4.85
CD71+_EarlyErythroid3.7
CD8+_Tcells3.9
CardiacMyocytes5
Caudatenucleus3.6
Cerebellum3.25
CerebellumPeduncles4.5
CiliaryGanglion2.8
CingulateCortex4.05
Colorectaladenocarcinoma4
DorsalRootGanglion3
FetalThyroid4.95
Fetalbrain4.05
Fetalliver3.5
Fetallung3.4
GlobusPallidus2.9
Heart5
Hypothalamus4.45
Kidney3.25
Leukemia_chronicMyelogenousK-5623.65
Leukemia_promyelocytic-HL-603.5
Leukemialymphoblastic(MOLT-4)3.25
Liver7.25
Lung4.7
Lymphnode3.4
Lymphoma_burkitts(Daudi)5.1
Lymphoma_burkitts(Raji)5.6
MedullaOblongata3.7
OccipitalLobe3.6
OlfactoryBulb3.2
Ovary2.65
Pancreas3.2
PancreaticIslet6.8
ParietalLobe4.1
Pituitary4.65
Placenta4.2
Pons3.8
PrefrontalCortex5
Prostate13.8
Salivarygland3.2
SkeletalMuscle4.4
Skin3.05
SmoothMuscle4.55
Spinalcord4.3
SubthalamicNucleus3.55
SuperiorCervicalGanglion4.45
TemporalLobe3.45
Testis5.6
TestisGermCell6.8
TestisIntersitial3.35
TestisLeydigCell3.95
TestisSeminiferousTubule3.45
Thalamus4.05
Thymus3.15
Thyroid12
Tongue4.1
Tonsil3.9
Trachea4.9
TrigeminalGanglion3.95
Uterus3.3
UterusCorpus3.55
WholeBlood4.4
Wholebrain4.7
colon5.8
pineal_day5.36
pineal_night5.4
retina5.575
small_intestine3.9
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_12967_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala6 ± 0.36
Basal Forebrain5.92 ± 0.33
Basal Part of Pons6.01 ± 0.37
Cerebellar Cortex5.96 ± 0.29
Cerebellar Nuclei6.24 ± 0.49
Claustrum5.74 ± 0.4
Epithalamus6.22 ± 0.65
Frontal Lobe6.17 ± 0.33
Globus Pallidus6.31 ± 0.28
Hypothalamus6.3 ± 0.37
Insula6.19 ± 0.34
Limbic Lobe5.88 ± 0.46
Mesencephalon6.16 ± 0.47
Myelencephalon6.03 ± 0.39
Occipital Lobe5.61 ± 0.45
Parietal Lobe5.99 ± 0.37
Pontine Tegmentum6.04 ± 0.43
Striatum5.95 ± 0.42
Subthalamus6.41 ± 0.17
Temporal Lobe6.17 ± 0.36
Thalamus6.12 ± 0.34
White Matter6.28 ± 0.12
Mouse Brain ISH
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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