Annotation Detail for PIP
Basic Information Top
| Gene Symbol: | PIP ( GCDFP-15,GCDFP15,GPIP4 ) |
|---|---|
| Gene Full Name: | prolactin-induced protein |
| Band: | 7q34 |
| Quick Links | Entrez ID:5304; OMIM: 176720; Uniprot ID:PIP_HUMAN; ENSEMBL ID: ENSG00000159763; HGNC ID: 8993 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.99949
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 0 / 564012 | 0 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 53 / 1939121 | 27 |  |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 |  |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 0 / 263845 | 0 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 1 / 136302 | 7 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 123 / 3360307 | 36 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 0 / 1100989 | 0 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 1 / 149255 | 6 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 0 / 215722 | 0 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 35 / 211054 | 165 |  |
| heart | 0 / 89626 | 0 | |
| intestine | 0 / 234472 | 0 | |
| kidney | 0 / 211777 | 0 | |
| larynx | 1 / 24145 | 41 | |
| liver | 0 / 207743 | 0 | |
| lung | 2 / 336974 | 5 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 3 / 153271 | 19 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 4 / 107715 | 37 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 0 / 214812 | 0 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 2 / 41328 | 48 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 0 / 280825 | 0 | |
| prostate | 21 / 189345 | 110 | |
| salivary gland | 15 / 20155 | 744 |  |
| skin | 0 / 210574 | 0 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 0 / 330442 | 0 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 2 / 52413 | 38 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 0 / 232878 | 0 | |
| vascular | 0 / 51780 | 0 |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 206509_at
| Cell line | Expression level | Expression bar |
|---|---|---|
| ||
| 721_B_lymphoblasts | 24 | |
| Adipocyte | 54.95 | |
| AdrenalCortex | 49 | |
| Adrenalgland | 38.05 | |
| Amygdala | 45.65 | |
| Appendix | 48.55 | |
| AtrioventricularNode | 51.75 | |
| BDCA4+_DentriticCells | 31.7 | |
| Bonemarrow | 44.5 | |
| BronchialEpithelialCells | 43.05 | |
| CD105+_Endothelial | 23 | |
| CD14+_Monocytes | 20.9 | |
| CD19+_BCells(neg._sel.) | 30 | |
| CD33+_Myeloid | 32.15 | |
| CD34+ | 27.3 | |
| CD4+_Tcells | 37.75 | |
| CD56+_NKCells | 29.4 | |
| CD71+_EarlyErythroid | 33.85 | |
| CD8+_Tcells | 31.95 | |
| CardiacMyocytes | 42.1 | |
| Caudatenucleus | 45.75 | |
| Cerebellum | 60.2 | |
| CerebellumPeduncles | 51.55 | |
| CiliaryGanglion | 46.75 | |
| CingulateCortex | 47.7 | |
| Colorectaladenocarcinoma | 40.1 | |
| DorsalRootGanglion | 39.65 | |
| FetalThyroid | 46.2 | |
| Fetalbrain | 43.6 | |
| Fetalliver | 51.75 | |
| Fetallung | 36.2 | |
| GlobusPallidus | 36.4 | |
| Heart | 64.4 | |
| Hypothalamus | 48.15 | |
| Kidney | 38.55 | |
| Leukemia_chronicMyelogenousK-562 | 39.8 | |
| Leukemia_promyelocytic-HL-60 | 37.5 | |
| Leukemialymphoblastic(MOLT-4) | 35.2 | |
| Liver | 101.15 | |
| Lung | 45.4 | |
| Lymphnode | 41.75 | |
| Lymphoma_burkitts(Daudi) | 51.65 | |
| Lymphoma_burkitts(Raji) | 60.95 | |
| MedullaOblongata | 40.4 | |
| OccipitalLobe | 39.85 | |
| OlfactoryBulb | 39.95 | |
| Ovary | 38.7 | |
| Pancreas | 35.55 | |
| PancreaticIslet | 47.65 | |
| ParietalLobe | 50.15 | |
| Pituitary | 71.9 | |
| Placenta | 45.3 | |
| Pons | 61.45 | |
| PrefrontalCortex | 55.6 | |
| Prostate | 639.5 | |
| Salivarygland | 17787.75 |  |
| SkeletalMuscle | 57.65 | |
| Skin | 605.9 | |
| SmoothMuscle | 50.45 | |
| Spinalcord | 47.6 | |
| SubthalamicNucleus | 40.85 | |
| SuperiorCervicalGanglion | 57.4 | |
| TemporalLobe | 40.55 | |
| Testis | 55 | |
| TestisGermCell | 37.3 | |
| TestisIntersitial | 37.15 | |
| TestisLeydigCell | 44 | |
| TestisSeminiferousTubule | 38.2 | |
| Thalamus | 218.35 | |
| Thymus | 47.25 | |
| Thyroid | 229.7 | |
| Tongue | 44.85 | |
| Tonsil | 42.9 | |
| Trachea | 10084.25 | |
| TrigeminalGanglion | 49.2 | |
| Uterus | 35.85 | |
| UterusCorpus | 40.25 | |
| WholeBlood | 48.9 | |
| Wholebrain | 36.15 | |
| colon | 27.45 | |
| pineal_day | 44.62 | |
| pineal_night | 37.3 | |
| retina | 56.625 | |
| small_intestine | 30.6 | |
- Probe name: CUST_8955_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 3.67 ± 0.96 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 3.97 ± 0.53 | |
| Basal Part of Pons | 3.44 ± 0.8 | |
| Cerebellar Cortex | 3.28 ± 0.75 | |
| Cerebellar Nuclei | 3.93 ± 0.64 | |
| Claustrum | 4.11 ± 0.94 | |
| Epithalamus | 2.77 ± 0.8 | |
| Frontal Lobe | 3.5 ± 0.76 | |
| Globus Pallidus | 3.99 ± 0.67 | |
| Hypothalamus | 3.13 ± 0.82 | |
| Insula | 3.2 ± 0.68 | |
| Limbic Lobe | 3.53 ± 0.81 | |
| Mesencephalon | 3.83 ± 0.65 | |
| Myelencephalon | 3.67 ± 0.83 | |
| Occipital Lobe | 3.56 ± 0.83 | |
| Parietal Lobe | 3.57 ± 0.75 | |
| Pontine Tegmentum | 3.56 ± 0.72 | |
| Striatum | 3.94 ± 0.65 | |
| Subthalamus | 3.51 ± 0.53 | |
| Temporal Lobe | 3.45 ± 0.76 | |
| Thalamus | 3.82 ± 0.71 | |
| White Matter | 3.99 ± 0.8 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Pip | CB | Cerebellum | 0 | |
| 0 | | |||
| Pip | CTX | Cerebral cortex | 0 | |
| 0 | | |||
| Pip | HIP | Hippocampal region | 0 | |
| 0 | | |||
| Pip | HPF | Hippocampal formation | 0 | |
| 0 | | |||
| Pip | HY | Hypothalamus | 0 | |
| 0 | | |||
| Pip | LSX | Lateral septal complex | 0 | |
| 0 | | |||
| Pip | MB | Midbrain | 0 | |
| 0 | | |||
| Pip | MY | Medulla | 0 | |
| 0 | | |||
| Pip | OLF | Olfactory bulb | 0 | |
| 0 | | |||
| Pip | P | Pons | 0 | |
| 0 | | |||
| Pip | PAL | Pallidum | 0 | |
| 0 | | |||
| Pip | RHP | Retrohippocampal region | 0 | |
| 0 | | |||
| Pip | sAMY | Striatum-like amygdalar nuclei | 0 | |
| 0 | | |||
| Pip | STR | Striatum | 0 | |
| 0 | | |||
| Pip | STRd | Striatum dorsal region | 0 | |
| 0 | | |||
| Pip | STRv | Striatum ventral region | 0 | |
| 0 | | |||
| Pip | TH | Thalamus | 0 | |
| 0 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00037976 | 19 | 45 | 63 | SVRPNDEVTAVLAVQTELK | Peptide Atlas |
| PIP_HUMAN_0 | 0 | 0 | 0 | TVQIAAVVDVIR | PRIDE |
| PIP_HUMAN_119 | 15 | 119 | 133 | ELGICPDDAAVIPIK | PRIDE |
| PIP_HUMAN_137 | 8 | 137 | 144 | FYTIEILK | PRIDE |
| PIP_HUMAN_2 | 8 | 2 | 9 | RLLQLLFR | PRIDE |
| PIP_HUMAN_70 | 16 | 70 | 85 | TYLISSIPLQGAFNYK | PRIDE |
| PIP_HUMAN_86 | 11 | 86 | 96 | YTACLCDDNPK | PRIDE |