AutismKB 2.0

Annotation Detail for IL20RA


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Basic Information Top
Gene Symbol:IL20RA ( FLJ40993,IL-20R1,ZCYTOR7 )
Gene Full Name: interleukin 20 receptor, alpha
Band: 6q23.3
Quick LinksEntrez ID:53832; OMIM: 605620; Uniprot ID:I20RA_HUMAN; ENSEMBL ID: ENSG00000016402; HGNC ID: 6003
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus4 / 5640127
neonate2 / 3109764
infant0 / 236200 
juvenile0 / 555560 
adult35 / 193912118
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma1 / 1747557
breast (mammary gland) tumor3 / 9417831
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor3 / 11424626
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor2 / 2638457
glioma2 / 10688318
head and neck tumor3 / 13630222
kidney tumor2 / 6895929
leukemia2 / 9584220
liver tumor1 / 9635910
lung tumor1 / 1031279
lymphoma0 / 717550 
non-neoplasia3 / 9725030
normal59 / 336030717
ovarian tumor1 / 7668213
pancreatic tumor2 / 10461619
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland1 / 3319730
ascites0 / 400150 
bladder1 / 2975733
blood0 / 1234780 
bone0 / 716550 
bone marrow0 / 488010 
brain10 / 11009899
cervix0 / 481710 
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus0 / 202090 
eye10 / 21105447
heart0 / 896260 
intestine14 / 23447259
kidney2 / 2117779
larynx0 / 241450 
liver1 / 2077434
lung28 / 33697483
lymph0 / 442700 
lymph node0 / 916100 
mammary gland3 / 15327119
mouth3 / 6705244
muscle1 / 1077159
nerve0 / 157680 
ovary1 / 1020519
pancreas2 / 2148129
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland1 / 1658560
placenta0 / 2808250 
prostate20 / 189345105
salivary gland0 / 201550 
skin4 / 21057418
spleen0 / 539520 
stomach0 / 966190 
testis4 / 33044212
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord1 / 1368073
uterus4 / 23287817
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 219115_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts6.85
Adipocyte5.6
AdrenalCortex6.6
Adrenalgland4.95
Amygdala5.75
Appendix6.8
AtrioventricularNode5.15
BDCA4+_DentriticCells6.15
Bonemarrow5.85
BronchialEpithelialCells5.5
CD105+_Endothelial5.8
CD14+_Monocytes6.15
CD19+_BCells(neg._sel.)6
CD33+_Myeloid7.05
CD34+6.95
CD4+_Tcells6.2
CD56+_NKCells6.55
CD71+_EarlyErythroid5.4
CD8+_Tcells5.5
CardiacMyocytes7.95
Caudatenucleus5.15
Cerebellum4.65
CerebellumPeduncles6.75
CiliaryGanglion5.55
CingulateCortex5.9
Colorectaladenocarcinoma5.7
DorsalRootGanglion4.65
FetalThyroid5.65
Fetalbrain5.45
Fetalliver5.05
Fetallung4.35
GlobusPallidus4.45
Heart7.8
Hypothalamus6.1
Kidney5.15
Leukemia_chronicMyelogenousK-5625.15
Leukemia_promyelocytic-HL-605.1
Leukemialymphoblastic(MOLT-4)4.55
Liver8.1
Lung6.2
Lymphnode4.85
Lymphoma_burkitts(Daudi)7.45
Lymphoma_burkitts(Raji)8.3
MedullaOblongata5.2
OccipitalLobe5.1
OlfactoryBulb4.45
Ovary3.9
Pancreas4.7
PancreaticIslet6.2
ParietalLobe6.2
Pituitary6.7
Placenta5.65
Pons5.6
PrefrontalCortex7
Prostate6.6
Salivarygland4.7
SkeletalMuscle7.75
Skin5.15
SmoothMuscle6.35
Spinalcord6.15
SubthalamicNucleus5.35
SuperiorCervicalGanglion7.2
TemporalLobe5.4
Testis4.9
TestisGermCell4.6
TestisIntersitial4.9
TestisLeydigCell5.7
TestisSeminiferousTubule4.9
Thalamus5.9
Thymus4.3
Thyroid7
Tongue5.8
Tonsil5.55
Trachea4.75
TrigeminalGanglion6.15
Uterus4.55
UterusCorpus5.6
WholeBlood6.15
Wholebrain4.5
colon5.7
pineal_day7.06
pineal_night6.9
retina6.9
small_intestine5.5
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_10024_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala3.36 ± 0.89
Basal Forebrain4.03 ± 0.31
Basal Part of Pons2.04 ± 0.68
Cerebellar Cortex4.24 ± 0.46
Cerebellar Nuclei4.08 ± 1.03
Claustrum3.57 ± 0.95
Epithalamus5.19 ± 0.38
Frontal Lobe3.33 ± 0.99
Globus Pallidus5.41 ± 1.15
Hypothalamus4.21 ± 0.47
Insula3.18 ± 0.69
Limbic Lobe3.16 ± 0.94
Mesencephalon4 ± 0.76
Myelencephalon3.64 ± 0.94
Occipital Lobe3.95 ± 1.05
Parietal Lobe3.51 ± 0.96
Pontine Tegmentum3.87 ± 0.8
Striatum4.04 ± 1.13
Subthalamus3.79 ± 0.56
Temporal Lobe2.93 ± 0.97
Thalamus4.22 ± 0.5
White Matter3.1 ± 1.1
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Il20raCBCerebellum5.42
6.4
Il20raCTXCerebral cortex5.18
5.17
Il20raHIPHippocampal region4.15
4.24
Il20raHPFHippocampal formation4.71
4.37
Il20raHYHypothalamus0.91
0.97
Il20raLSXLateral septal complex1.27
1.02
Il20raMBMidbrain2.31
2.92
Il20raMYMedulla9.37
9.12
Il20raOLFOlfactory bulb13.46
10.24
Il20raPPons3.28
4.47
Il20raPALPallidum1.83
1.56
Il20raRHPRetrohippocampal region5.91
4.73
Il20rasAMYStriatum-like amygdalar nuclei2.94
3.14
Il20raSTRStriatum4.1
3.07
Il20raSTRdStriatum dorsal region4.17
3.04
Il20raSTRvStriatum ventral region5.53
3.89
Il20raTHThalamus1.46
1.46
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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