Annotation Detail for FGFRL1
Basic Information Top
| Gene Symbol: | FGFRL1 ( FGFR5,FHFR ) |
|---|---|
| Gene Full Name: | fibroblast growth factor receptor-like 1 |
| Band: | 4p16.3 |
| Quick Links | Entrez ID:53834; OMIM: 605830; Uniprot ID:FGRL1_HUMAN; ENSEMBL ID: ENSG00000127418; HGNC ID: 3693 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.193326
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 7 / 564012 | 12 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 72 / 1939121 | 37 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 4 / 12794 | 312 |  |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 2 / 94178 | 21 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 9 / 82823 | 108 |  |
| colorectal tumor | 11 / 114246 | 96 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 12 / 119369 | 100 | |
| germ cell tumor | 3 / 263845 | 11 | |
| glioma | 3 / 106883 | 28 | |
| head and neck tumor | 6 / 136302 | 44 | |
| kidney tumor | 6 / 68959 | 87 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 1 / 96359 | 10 |  |
| lung tumor | 11 / 103127 | 106 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 4 / 97250 | 41 | |
| normal | 48 / 3360307 | 14 | |
| ovarian tumor | 11 / 76682 | 143 | |
| pancreatic tumor | 13 / 104616 | 124 | |
| primitive neuroectodermal tumor of the CNS | 1 / 125680 | 7 | |
| prostate cancer | 21 / 102680 | 204 | |
| retinoblastoma | 3 / 46356 | 64 | |
| skin tumor | 2 / 124949 | 16 | |
| soft tissue/muscle tissue tumor | 8 / 125191 | 63 | |
| uterine tumor | 5 / 90257 | 55 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 5 / 33197 | 150 | |
| ascites | 4 / 40015 | 99 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 6 / 71655 | 83 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 19 / 1100989 | 17 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 8 / 149255 | 53 | |
| ear | 1 / 16212 | 61 | |
| embryonic tissue | 2 / 215722 | 9 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 11 / 211054 | 52 | |
| heart | 0 / 89626 | 0 | |
| intestine | 19 / 234472 | 81 | |
| kidney | 10 / 211777 | 47 | |
| larynx | 0 / 24145 | 0 | |
| liver | 1 / 207743 | 4 | |
| lung | 13 / 336974 | 38 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 2 / 91610 | 21 | |
| mammary gland | 3 / 153271 | 19 | |
| mouth | 2 / 67052 | 29 | |
| muscle | 7 / 107715 | 64 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 12 / 102051 | 117 | |
| pancreas | 13 / 214812 | 60 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 3 / 280825 | 10 | |
| prostate | 24 / 189345 | 126 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 3 / 210574 | 14 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 2 / 96619 | 20 | |
| testis | 4 / 330442 | 12 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 5 / 47473 | 105 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 1 / 52413 | 19 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 5 / 232878 | 21 | |
| vascular | 2 / 51780 | 38 | |
Microarray in - Probe name: A_23_P92349
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.45 ± 0.63 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 4.55 ± 0.53 | |
| Basal Part of Pons | 3.99 ± 0.89 | |
| Cerebellar Cortex | 3.97 ± 0.47 | |
| Cerebellar Nuclei | 3.98 ± 0.47 | |
| Claustrum | 3.56 ± 1.09 | |
| Epithalamus | 4.3 ± 0.62 | |
| Frontal Lobe | 4.37 ± 0.72 | |
| Globus Pallidus | 4.06 ± 0.57 | |
| Hypothalamus | 4.38 ± 0.58 | |
| Insula | 4.41 ± 0.58 | |
| Limbic Lobe | 4.21 ± 0.72 | |
| Mesencephalon | 4.34 ± 0.77 | |
| Myelencephalon | 4.41 ± 0.66 | |
| Occipital Lobe | 4.95 ± 0.59 | |
| Parietal Lobe | 4.51 ± 0.56 | |
| Pontine Tegmentum | 4.49 ± 0.64 | |
| Striatum | 5.11 ± 0.54 | |
| Subthalamus | 4.34 ± 0.33 | |
| Temporal Lobe | 4.36 ± 0.61 | |
| Thalamus | 4.29 ± 0.61 | |
| White Matter | 3.63 ± 0.33 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Fgfrl1 | CB | Cerebellum | 2.98 | |
| 2.98 | | |||
| Fgfrl1 | CTX | Cerebral cortex | 0.83 | |
| 0.72 | | |||
| Fgfrl1 | HIP | Hippocampal region | 0.42 | |
| 0.46 | | |||
| Fgfrl1 | HPF | Hippocampal formation | 0.43 | |
| 0.51 | | |||
| Fgfrl1 | HY | Hypothalamus | 0.36 | |
| 0.35 | | |||
| Fgfrl1 | LSX | Lateral septal complex | 0.23 | |
| 0.17 | | |||
| Fgfrl1 | MB | Midbrain | 0.84 | |
| 0.65 | | |||
| Fgfrl1 | MY | Medulla | 1.44 | |
| 0.99 | | |||
| Fgfrl1 | OLF | Olfactory bulb | 1.33 | |
| 1.86 | | |||
| Fgfrl1 | P | Pons | 0.72 | |
| 0.43 | | |||
| Fgfrl1 | PAL | Pallidum | 0.23 | |
| 0.11 | | |||
| Fgfrl1 | RHP | Retrohippocampal region | 0.45 | |
| 0.64 | | |||
| Fgfrl1 | sAMY | Striatum-like amygdalar nuclei | 0.34 | |
| 0.23 | | |||
| Fgfrl1 | STR | Striatum | 0.35 | |
| 0.32 | | |||
| Fgfrl1 | STRd | Striatum dorsal region | 0.4 | |
| 0.43 | | |||
| Fgfrl1 | STRv | Striatum ventral region | 0.18 | |
| 0.09 | | |||
| Fgfrl1 | TH | Thalamus | 0.5 | |
| 0.38 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00043050 | 9 | 496 | 504 | VHQHIHYQC | Peptide Atlas |