Annotation Detail for SEPT5
Basic Information Top
| Gene Symbol: | SEPT5 ( CDCREL,CDCREL-1,CDCREL1,H5,PNUTL1 ) |
|---|---|
| Gene Full Name: | septin 5 |
| Band: | 22q11.21 |
| Quick Links | Entrez ID:5413; OMIM: 602724; Uniprot ID:SEPT5_HUMAN; ENSEMBL ID: ENSG00000184702; HGNC ID: 9164 |
| Relate to Another Database: | SFARIGene; denovo-db |
Unigene EST- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 209768_s_at
| Cell line | Expression level | Expression bar |
|---|---|---|
 | ||
| 721_B_lymphoblasts | 16.6 |  |
| Adipocyte | 19.3 | |
| AdrenalCortex | 22.7 | |
| Adrenalgland | 16.85 | |
| Amygdala | 21.85 | |
| Appendix | 20.35 | |
| AtrioventricularNode | 17.05 | |
| BDCA4+_DentriticCells | 18.5 | |
| Bonemarrow | 20.65 | |
| BronchialEpithelialCells | 17.45 | |
| CD105+_Endothelial | 19.35 | |
| CD14+_Monocytes | 15.9 | |
| CD19+_BCells(neg._sel.) | 18.6 | |
| CD33+_Myeloid | 20.9 | |
| CD34+ | 21.8 | |
| CD4+_Tcells | 21.45 | |
| CD56+_NKCells | 20.2 | |
| CD71+_EarlyErythroid | 18.6 | |
| CD8+_Tcells | 19.3 | |
| CardiacMyocytes | 26.15 | |
| Caudatenucleus | 37.6 | |
| Cerebellum | 16.2 | |
| CerebellumPeduncles | 48.15 | |
| CiliaryGanglion | 15.7 | |
| CingulateCortex | 36.05 | |
| Colorectaladenocarcinoma | 20 | |
| DorsalRootGanglion | 15.75 | |
| FetalThyroid | 18.7 | |
| Fetalbrain | 50.1 |  |
| Fetalliver | 17.25 | |
| Fetallung | 14.75 | |
| GlobusPallidus | 15.1 | |
| Heart | 28.7 | |
| Hypothalamus | 19.15 | |
| Kidney | 16.9 | |
| Leukemia_chronicMyelogenousK-562 | 22.1 | |
| Leukemia_promyelocytic-HL-60 | 17.4 | |
| Leukemialymphoblastic(MOLT-4) | 16.15 | |
| Liver | 26.45 | |
| Lung | 19.4 | |
| Lymphnode | 16.65 | |
| Lymphoma_burkitts(Daudi) | 25.3 | |
| Lymphoma_burkitts(Raji) | 28.6 | |
| MedullaOblongata | 18.25 | |
| OccipitalLobe | 20 | |
| OlfactoryBulb | 15.5 | |
| Ovary | 17.7 | |
| Pancreas | 16.15 | |
| PancreaticIslet | 20.5 | |
| ParietalLobe | 37.5 | |
| Pituitary | 23 | |
| Placenta | 17.35 | |
| Pons | 40.8 | |
| PrefrontalCortex | 27.95 | |
| Prostate | 22.5 | |
| Salivarygland | 16.15 | |
| SkeletalMuscle | 37.55 | |
| Skin | 22.15 | |
| SmoothMuscle | 19.05 | |
| Spinalcord | 21.4 | |
| SubthalamicNucleus | 25.8 | |
| SuperiorCervicalGanglion | 22.95 | |
| TemporalLobe | 35.4 | |
| Testis | 16.35 | |
| TestisGermCell | 16 | |
| TestisIntersitial | 16.8 | |
| TestisLeydigCell | 21.45 | |
| TestisSeminiferousTubule | 17.3 | |
| Thalamus | 31 | |
| Thymus | 11.6 | |
| Thyroid | 22.1 | |
| Tongue | 24.7 | |
| Tonsil | 20.5 | |
| Trachea | 16.2 | |
| TrigeminalGanglion | 21.2 | |
| Uterus | 15.7 | |
| UterusCorpus | 19.75 | |
| WholeBlood | 19.8 | |
| Wholebrain | 23.3 | |
| colon | 20.35 | |
| pineal_day | 26.52 | |
| pineal_night | 25.24 | |
| retina | 31.425 | |
| small_intestine | 17.5 | |
- Probe name: A_24_P297166
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 6.3 ± 0.63 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 5.56 ± 0.4 | |
| Basal Part of Pons | 6.08 ± 0.35 | |
| Cerebellar Cortex | 5.35 ± 0.3 | |
| Cerebellar Nuclei | 4.49 ± 0.84 | |
| Claustrum | 6.14 ± 0.58 | |
| Epithalamus | 4.78 ± 0.89 | |
| Frontal Lobe | 5.81 ± 0.67 | |
| Globus Pallidus | 3.69 ± 0.94 | |
| Hypothalamus | 4.92 ± 0.53 | |
| Insula | 6.03 ± 0.19 | |
| Limbic Lobe | 6.13 ± 0.53 | |
| Mesencephalon | 5.29 ± 0.63 | |
| Myelencephalon | 5.6 ± 0.58 | |
| Occipital Lobe | 5.19 ± 0.73 | |
| Parietal Lobe | 5.68 ± 0.63 | |
| Pontine Tegmentum | 5.49 ± 0.69 | |
| Striatum | 5.92 ± 0.64 | |
| Subthalamus | 5.01 ± 0.42 | |
| Temporal Lobe | 6.07 ± 0.49 | |
| Thalamus | 5.46 ± 0.44 | |
| White Matter | 3.45 ± 0.38 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Sept5 | CB | Cerebellum | 30.02 | |
| 44.74 | | |||
| Sept5 | CTX | Cerebral cortex | 85.79 | |
| 76.97 | | |||
| Sept5 | HIP | Hippocampal region | 57.77 | |
| 71.89 | | |||
| Sept5 | HPF | Hippocampal formation | 56.18 | |
| 64.54 | | |||
| Sept5 | HY | Hypothalamus | 17.46 | |
| 12.33 | | |||
| Sept5 | LSX | Lateral septal complex | 10.57 | |
| 8.22 | | |||
| Sept5 | MB | Midbrain | 25.58 | |
| 24.2 | | |||
| Sept5 | MY | Medulla | 37.61 | |
| 37.22 | | |||
| Sept5 | OLF | Olfactory bulb | 75.76 | |
| 79.37 | | |||
| Sept5 | P | Pons | 27.55 | |
| 29.53 | | |||
| Sept5 | PAL | Pallidum | 9.01 | |
| 8.6 | | |||
| Sept5 | RHP | Retrohippocampal region | 51.97 | |
| 51.88 | | |||
| Sept5 | sAMY | Striatum-like amygdalar nuclei | 38.85 | |
| 31 | | |||
| Sept5 | STR | Striatum | 28.94 | |
| 21.48 | | |||
| Sept5 | STRd | Striatum dorsal region | 26.54 | |
| 19.93 | | |||
| Sept5 | STRv | Striatum ventral region | 40.57 | |
| 26.88 | | |||
| Sept5 | TH | Thalamus | 44.73 | |
| 45.34 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00026810 | 19 | 264 | 282 | LYPWGIVEVENQAHCDFVK | Peptide Atlas |