AutismKB 2.0

Annotation Detail for GFOD1


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Basic Information Top
Gene Symbol:GFOD1 ( - )
Gene Full Name: glucose-fructose oxidoreductase domain containing 1
Band: 6p24.1-p23
Quick LinksEntrez ID:54438; OMIM: NA; Uniprot ID:GFOD1_HUMAN; ENSEMBL ID: ENSG00000145990; HGNC ID: 21096
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus5 / 5640128
neonate1 / 3109732
infant0 / 236200 
juvenile2 / 5555635
adult13 / 19391216
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor0 / 1142460 
esophageal tumor1 / 1729057
gastrointestinal tumor0 / 1193690 
germ cell tumor4 / 26384515
glioma0 / 1068830 
head and neck tumor0 / 1363020 
kidney tumor1 / 6895914
leukemia4 / 9584241
liver tumor1 / 9635910
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal32 / 33603079
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer3 / 10268029
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood2 / 12347816
bone0 / 716550 
bone marrow0 / 488010 
brain15 / 110098913
cervix0 / 481710 
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus1 / 2020949
eye0 / 2110540 
heart4 / 8962644
intestine1 / 2344724
kidney4 / 21177718
larynx0 / 241450 
liver1 / 2077434
lung0 / 3369740 
lymph0 / 442700 
lymph node3 / 9161032
mammary gland2 / 15327113
mouth0 / 670520 
muscle1 / 1077159
nerve0 / 157680 
ovary0 / 1020510 
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta3 / 28082510
prostate3 / 18934515
salivary gland0 / 201550 
skin0 / 2105740 
spleen0 / 539520 
stomach1 / 9661910
testis1 / 3304423
thymus4 / 8113149
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus2 / 2328788
vascular1 / 5178019
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 219821_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts55.35
Adipocyte24.25
AdrenalCortex37.05
Adrenalgland27.95
Amygdala135.55
Appendix57.05
AtrioventricularNode29
BDCA4+_DentriticCells24.45
Bonemarrow60.8
BronchialEpithelialCells34.85
CD105+_Endothelial54.7
CD14+_Monocytes28.55
CD19+_BCells(neg._sel.)39.95
CD33+_Myeloid46.05
CD34+43.6
CD4+_Tcells27
CD56+_NKCells133.2
CD71+_EarlyErythroid55.7
CD8+_Tcells28.3
CardiacMyocytes65.55
Caudatenucleus47.55
Cerebellum130.35
CerebellumPeduncles153.75
CiliaryGanglion26.95
CingulateCortex164.05
Colorectaladenocarcinoma34.75
DorsalRootGanglion54.9
FetalThyroid29.3
Fetalbrain59
Fetalliver31.55
Fetallung23.25
GlobusPallidus98.1
Heart50.85
Hypothalamus48.75
Kidney27.75
Leukemia_chronicMyelogenousK-56224.45
Leukemia_promyelocytic-HL-6030.5
Leukemialymphoblastic(MOLT-4)25.15
Liver39.45
Lung74.1
Lymphnode23.4
Lymphoma_burkitts(Daudi)45.9
Lymphoma_burkitts(Raji)43.3
MedullaOblongata102.95
OccipitalLobe114.1
OlfactoryBulb31.65
Ovary27.85
Pancreas25.8
PancreaticIslet44.2
ParietalLobe99.6
Pituitary42.25
Placenta66.7
Pons104.05
PrefrontalCortex323.05
Prostate55.1
Salivarygland35
SkeletalMuscle58.5
Skin31.65
SmoothMuscle30.8
Spinalcord30.85
SubthalamicNucleus110.75
SuperiorCervicalGanglion55.3
TemporalLobe98.65
Testis20
TestisGermCell24.8
TestisIntersitial27.6
TestisLeydigCell39.5
TestisSeminiferousTubule31.6
Thalamus55.6
Thymus27.9
Thyroid31.75
Tongue54.95
Tonsil35.35
Trachea27.15
TrigeminalGanglion46.65
Uterus35.35
UterusCorpus31.25
WholeBlood27.85
Wholebrain211.6
colon22.05
pineal_day71.76
pineal_night88.28
retina55.825
small_intestine38.2
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P122662
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala11.78 ± 0.45
Basal Forebrain11.15 ± 0.32
Basal Part of Pons11.4 ± 0.38
Cerebellar Cortex11.84 ± 0.21
Cerebellar Nuclei11.33 ± 0.52
Claustrum12.11 ± 0.41
Epithalamus10.42 ± 0.6
Frontal Lobe11.55 ± 0.47
Globus Pallidus9.97 ± 0.55
Hypothalamus11.06 ± 0.44
Insula11.72 ± 0.3
Limbic Lobe12.01 ± 0.6
Mesencephalon11.53 ± 0.48
Myelencephalon11.49 ± 0.54
Occipital Lobe12.02 ± 0.25
Parietal Lobe11.89 ± 0.31
Pontine Tegmentum11.55 ± 0.46
Striatum10.89 ± 0.63
Subthalamus11.59 ± 0.26
Temporal Lobe11.77 ± 0.29
Thalamus11.16 ± 0.33
White Matter9.56 ± 0.49
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Gfod1CBCerebellum34.77
65.32
Gfod1CTXCerebral cortex81.33
68.19
Gfod1HIPHippocampal region59.43
91.34
Gfod1HPFHippocampal formation50.35
65.43
Gfod1HYHypothalamus5.64
4.42
Gfod1LSXLateral septal complex6.57
4.58
Gfod1MBMidbrain13.08
13.59
Gfod1MYMedulla20.75
27.33
Gfod1OLFOlfactory bulb35.81
29.21
Gfod1PPons35.18
47.27
Gfod1PALPallidum7.36
6.66
Gfod1RHPRetrohippocampal region33.81
27.51
Gfod1sAMYStriatum-like amygdalar nuclei10.38
7.44
Gfod1STRStriatum27.93
19.82
Gfod1STRdStriatum dorsal region35.91
25.56
Gfod1STRvStriatum ventral region21.76
15.73
Gfod1THThalamus35.18
36.29
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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