Annotation Detail for PRMT7
Basic Information Top
| Gene Symbol: | PRMT7 ( FLJ10640,KIAA1933 ) |
|---|---|
| Gene Full Name: | protein arginine methyltransferase 7 |
| Band: | 16q22.1 |
| Quick Links | Entrez ID:54496; OMIM: 610087; Uniprot ID:ANM7_HUMAN; ENSEMBL ID: ENSG00000132600; HGNC ID: 25557 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.653193
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 7 / 62319 | 112 |  |
| fetus | 22 / 564012 | 39 | |
| neonate | 2 / 31097 | 64 | |
| infant | 1 / 23620 | 42 | |
| juvenile | 6 / 55556 | 107 | |
| adult | 73 / 1939121 | 37 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 5 / 94178 | 53 | |
| cervical tumor | 2 / 34366 | 58 | |
| chondrosarcoma | 2 / 82823 | 24 | |
| colorectal tumor | 7 / 114246 | 61 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 4 / 119369 | 33 | |
| germ cell tumor | 19 / 263845 | 72 | |
| glioma | 2 / 106883 | 18 | |
| head and neck tumor | 2 / 136302 | 14 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 10 / 95842 | 104 | |
| liver tumor | 2 / 96359 | 20 | |
| lung tumor | 5 / 103127 | 48 | |
| lymphoma | 4 / 71755 | 55 | |
| non-neoplasia | 2 / 97250 | 20 | |
| normal | 165 / 3360307 | 49 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 13 / 125680 | 103 | |
| prostate cancer | 4 / 102680 | 38 | |
| retinoblastoma | 2 / 46356 | 43 | |
| skin tumor | 4 / 124949 | 32 | |
| soft tissue/muscle tissue tumor | 2 / 125191 | 15 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 9 / 123478 | 72 | |
| bone | 3 / 71655 | 41 | |
| bone marrow | 4 / 48801 | 81 | |
| brain | 68 / 1100989 | 61 | |
| cervix | 3 / 48171 | 62 | |
| connective tissue | 10 / 149255 | 66 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 12 / 215722 | 55 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 9 / 211054 | 42 | |
| heart | 1 / 89626 | 11 | |
| intestine | 13 / 234472 | 55 | |
| kidney | 7 / 211777 | 33 | |
| larynx | 2 / 24145 | 82 | |
| liver | 6 / 207743 | 28 | |
| lung | 16 / 336974 | 47 | |
| lymph | 3 / 44270 | 67 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 8 / 153271 | 52 | |
| mouth | 1 / 67052 | 14 | |
| muscle | 6 / 107715 | 55 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 1 / 102051 | 9 |  |
| pancreas | 0 / 214812 | 0 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 7 / 280825 | 24 | |
| prostate | 15 / 189345 | 79 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 9 / 210574 | 42 | |
| spleen | 8 / 53952 | 148 | |
| stomach | 4 / 96619 | 41 | |
| testis | 14 / 330442 | 42 | |
| thymus | 25 / 81131 | 308 |  |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 1 / 16999 | 58 | |
| trachea | 3 / 52413 | 57 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 9 / 232878 | 38 | |
| vascular | 5 / 51780 | 96 | |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 219408_at
| Cell line | Expression level | Expression bar |
|---|---|---|
| ||
| 721_B_lymphoblasts | 5.95 | |
| Adipocyte | 4.6 | |
| AdrenalCortex | 4.95 | |
| Adrenalgland | 3.9 | |
| Amygdala | 4.85 | |
| Appendix | 4.65 | |
| AtrioventricularNode | 3.55 | |
| BDCA4+_DentriticCells | 10.4 | |
| Bonemarrow | 4.65 | |
| BronchialEpithelialCells | 4.6 | |
| CD105+_Endothelial | 5.1 | |
| CD14+_Monocytes | 5.15 | |
| CD19+_BCells(neg._sel.) | 5 | |
| CD33+_Myeloid | 5.95 | |
| CD34+ | 6.05 | |
| CD4+_Tcells | 5.2 | |
| CD56+_NKCells | 5.6 | |
| CD71+_EarlyErythroid | 4.35 | |
| CD8+_Tcells | 5 | |
| CardiacMyocytes | 6.45 | |
| Caudatenucleus | 4.15 | |
| Cerebellum | 3.75 | |
| CerebellumPeduncles | 5.25 | |
| CiliaryGanglion | 3.35 | |
| CingulateCortex | 4.7 | |
| Colorectaladenocarcinoma | 4.65 | |
| DorsalRootGanglion | 3.5 | |
| FetalThyroid | 4.5 | |
| Fetalbrain | 4.55 | |
| Fetalliver | 4 | |
| Fetallung | 3.85 | |
| GlobusPallidus | 3.45 | |
| Heart | 6.35 | |
| Hypothalamus | 5.1 | |
| Kidney | 3.75 | |
| Leukemia_chronicMyelogenousK-562 | 4.2 | |
| Leukemia_promyelocytic-HL-60 | 4.05 | |
| Leukemialymphoblastic(MOLT-4) | 3.7 | |
| Liver | 6.1 | |
| Lung | 5.2 | |
| Lymphnode | 3.95 | |
| Lymphoma_burkitts(Daudi) | 5.85 | |
| Lymphoma_burkitts(Raji) | 6.45 | |
| MedullaOblongata | 4.2 | |
| OccipitalLobe | 4.15 | |
| OlfactoryBulb | 3.65 | |
| Ovary | 3.05 | |
| Pancreas | 3.7 | |
| PancreaticIslet | 4.9 | |
| ParietalLobe | 4.9 | |
| Pituitary | 5.4 | |
| Placenta | 4.75 | |
| Pons | 4.4 | |
| PrefrontalCortex | 5.8 | |
| Prostate | 5.35 | |
| Salivarygland | 3.7 | |
| SkeletalMuscle | 5.6 | |
| Skin | 3.55 | |
| SmoothMuscle | 5.25 | |
| Spinalcord | 4.95 | |
| SubthalamicNucleus | 4.25 | |
| SuperiorCervicalGanglion | 5.15 | |
| TemporalLobe | 4.2 | |
| Testis | 4 | |
| TestisGermCell | 3.75 | |
| TestisIntersitial | 3.8 | |
| TestisLeydigCell | 4.55 | |
| TestisSeminiferousTubule | 3.9 | |
| Thalamus | 4.7 | |
| Thymus | 4.5 | |
| Thyroid | 5.9 | |
| Tongue | 4.5 | |
| Tonsil | 4.5 | |
| Trachea | 3.85 | |
| TrigeminalGanglion | 4.55 | |
| Uterus | 3.75 | |
| UterusCorpus | 4.15 | |
| WholeBlood | 5.1 | |
| Wholebrain | 4.05 | |
| colon | 4.65 | |
| pineal_day | 5.92 | |
| pineal_night | 5.68 | |
| retina | 5.6 | |
| small_intestine | 4.45 | |
- Probe name: A_23_P77437
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 3.67 ± 0.64 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 3.43 ± 0.75 | |
| Basal Part of Pons | 3.48 ± 0.58 | |
| Cerebellar Cortex | 3.68 ± 0.47 | |
| Cerebellar Nuclei | 3.22 ± 0.49 | |
| Claustrum | 3.67 ± 0.72 | |
| Epithalamus | 2.93 ± 0.59 | |
| Frontal Lobe | 3.39 ± 0.59 | |
| Globus Pallidus | 3 ± 0.79 | |
| Hypothalamus | 3.35 ± 0.38 | |
| Insula | 3.33 ± 0.47 | |
| Limbic Lobe | 3.45 ± 0.6 | |
| Mesencephalon | 3.25 ± 0.61 | |
| Myelencephalon | 3.38 ± 0.58 | |
| Occipital Lobe | 3.22 ± 0.71 | |
| Parietal Lobe | 3.39 ± 0.49 | |
| Pontine Tegmentum | 3.39 ± 0.66 | |
| Striatum | 3.25 ± 0.58 | |
| Subthalamus | 3.21 ± 0.71 | |
| Temporal Lobe | 3.35 ± 0.7 | |
| Thalamus | 3.28 ± 0.63 | |
| White Matter | 2.94 ± 0.69 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Prmt7 | CB | Cerebellum | 7.13 | |
| 9.21 | | |||
| Prmt7 | CTX | Cerebral cortex | 3.22 | |
| 2.64 | | |||
| Prmt7 | HIP | Hippocampal region | 7.32 | |
| 7.43 | | |||
| Prmt7 | HPF | Hippocampal formation | 5.81 | |
| 5.45 | | |||
| Prmt7 | HY | Hypothalamus | 1.56 | |
| 1.6 | | |||
| Prmt7 | LSX | Lateral septal complex | 0 | |
| 0 | | |||
| Prmt7 | MB | Midbrain | 2.47 | |
| 3.18 | | |||
| Prmt7 | MY | Medulla | 4.28 | |
| 6.99 | | |||
| Prmt7 | OLF | Olfactory bulb | 4.21 | |
| 3.94 | | |||
| Prmt7 | P | Pons | 3.06 | |
| 4.61 | | |||
| Prmt7 | PAL | Pallidum | 0.59 | |
| 0.66 | | |||
| Prmt7 | RHP | Retrohippocampal region | 3.49 | |
| 2.89 | | |||
| Prmt7 | sAMY | Striatum-like amygdalar nuclei | 0.38 | |
| 0.31 | | |||
| Prmt7 | STR | Striatum | 0.34 | |
| 0.31 | | |||
| Prmt7 | STRd | Striatum dorsal region | 0.21 | |
| 0.17 | | |||
| Prmt7 | STRv | Striatum ventral region | 0.86 | |
| 0.82 | | |||
| Prmt7 | TH | Thalamus | 1.94 | |
| 2.24 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00499355 | 16 | 122 | 137 | HSTEVTVGPEGDMPCR | Peptide Atlas |