Annotation Detail for MTRF1L
Basic Information Top
| Gene Symbol: | MTRF1L ( MGC102748,MRF1L,mtRF1a ) |
|---|---|
| Gene Full Name: | mitochondrial translational release factor 1-like |
| Band: | 6q25.2 |
| Quick Links | Entrez ID:54516; OMIM: 613542; Uniprot ID:RF1ML_HUMAN; ENSEMBL ID: ENSG00000112031; HGNC ID: 21051 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.225836
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 2 / 70761 | 28 |  |
| blastocyst | 1 / 62319 | 16 | |
| fetus | 39 / 564012 | 69 |  |
| neonate | 3 / 31097 | 96 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 2 / 55556 | 35 | |
| adult | 54 / 1939121 | 27 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 6 / 94178 | 63 | |
| cervical tumor | 1 / 34366 | 29 | |
| chondrosarcoma | 3 / 82823 | 36 | |
| colorectal tumor | 4 / 114246 | 35 | |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 1 / 119369 | 8 |  |
| germ cell tumor | 18 / 263845 | 68 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 4 / 136302 | 29 | |
| kidney tumor | 3 / 68959 | 43 | |
| leukemia | 1 / 95842 | 10 | |
| liver tumor | 4 / 96359 | 41 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 1 / 97250 | 10 | |
| normal | 139 / 3360307 | 41 | |
| ovarian tumor | 2 / 76682 | 26 | |
| pancreatic tumor | 2 / 104616 | 19 | |
| primitive neuroectodermal tumor of the CNS | 4 / 125680 | 31 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 2 / 46356 | 43 | |
| skin tumor | 5 / 124949 | 40 | |
| soft tissue/muscle tissue tumor | 3 / 125191 | 23 | |
| uterine tumor | 3 / 90257 | 33 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 1 / 29757 | 33 | |
| blood | 3 / 123478 | 24 | |
| bone | 2 / 71655 | 27 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 46 / 1100989 | 41 | |
| cervix | 1 / 48171 | 20 | |
| connective tissue | 4 / 149255 | 26 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 7 / 215722 | 32 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 5 / 211054 | 23 | |
| heart | 7 / 89626 | 78 | |
| intestine | 5 / 234472 | 21 | |
| kidney | 24 / 211777 | 113 | |
| larynx | 0 / 24145 | 0 | |
| liver | 4 / 207743 | 19 | |
| lung | 13 / 336974 | 38 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 4 / 91610 | 43 | |
| mammary gland | 6 / 153271 | 39 | |
| mouth | 6 / 67052 | 89 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 3 / 102051 | 29 | |
| pancreas | 7 / 214812 | 32 | |
| parathyroid | 1 / 20539 | 48 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 9 / 280825 | 32 | |
| prostate | 5 / 189345 | 26 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 13 / 210574 | 61 | |
| spleen | 3 / 53952 | 55 | |
| stomach | 3 / 96619 | 31 | |
| testis | 15 / 330442 | 45 | |
| thymus | 3 / 81131 | 36 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 7 / 52413 | 133 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 5 / 232878 | 21 | |
| vascular | 3 / 51780 | 57 | |
Microarray in - Probe name: A_23_P214882
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.81 ± 0.36 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 4.85 ± 0.42 | |
| Basal Part of Pons | 4.72 ± 0.33 | |
| Cerebellar Cortex | 4.58 ± 0.44 | |
| Cerebellar Nuclei | 5.16 ± 0.44 | |
| Claustrum | 4.9 ± 0.51 | |
| Epithalamus | 4.51 ± 0.33 | |
| Frontal Lobe | 4.72 ± 0.43 | |
| Globus Pallidus | 5.34 ± 0.34 | |
| Hypothalamus | 4.73 ± 0.38 | |
| Insula | 4.57 ± 0.47 | |
| Limbic Lobe | 4.61 ± 0.43 | |
| Mesencephalon | 4.86 ± 0.49 | |
| Myelencephalon | 4.69 ± 0.42 | |
| Occipital Lobe | 4.97 ± 0.32 | |
| Parietal Lobe | 4.86 ± 0.35 | |
| Pontine Tegmentum | 4.8 ± 0.41 | |
| Striatum | 4.43 ± 0.43 | |
| Subthalamus | 5.2 ± 0.19 | |
| Temporal Lobe | 4.61 ± 0.42 | |
| Thalamus | 4.9 ± 0.39 | |
| White Matter | 4.95 ± 0.18 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Mtrf1l | CB | Cerebellum | 0.86 | |
| 1.22 | | |||
| Mtrf1l | CTX | Cerebral cortex | 0.26 | |
| 0.4 | | |||
| Mtrf1l | HIP | Hippocampal region | 0.79 | |
| 1.06 | | |||
| Mtrf1l | HPF | Hippocampal formation | 0.55 | |
| 0.86 | | |||
| Mtrf1l | HY | Hypothalamus | 0.15 | |
| 0.15 | | |||
| Mtrf1l | LSX | Lateral septal complex | 0.14 | |
| 0.12 | | |||
| Mtrf1l | MB | Midbrain | 0.16 | |
| 0.26 | | |||
| Mtrf1l | MY | Medulla | 0.57 | |
| 0.75 | | |||
| Mtrf1l | OLF | Olfactory bulb | 0.61 | |
| 0.46 | | |||
| Mtrf1l | P | Pons | 0.25 | |
| 0.35 | | |||
| Mtrf1l | PAL | Pallidum | 0.34 | |
| 0.28 | | |||
| Mtrf1l | RHP | Retrohippocampal region | 0.17 | |
| 0.47 | | |||
| Mtrf1l | sAMY | Striatum-like amygdalar nuclei | 0.57 | |
| 0.35 | | |||
| Mtrf1l | STR | Striatum | 0.25 | |
| 0.23 | | |||
| Mtrf1l | STRd | Striatum dorsal region | 0.18 | |
| 0.21 | | |||
| Mtrf1l | STRv | Striatum ventral region | 0.34 | |
| 0.28 | | |||
| Mtrf1l | TH | Thalamus | 0.4 | |
| 0.42 | |