Annotation Detail for FBXL19
Basic Information Top
| Gene Symbol: | FBXL19 ( DKFZp434K0410,Fbl19,JHDM1C,MGC50505 ) |
|---|---|
| Gene Full Name: | F-box and leucine-rich repeat protein 19 |
| Band: | 16p11.2 |
| Quick Links | Entrez ID:54620; OMIM: 609085; Uniprot ID:FXL19_HUMAN; ENSEMBL ID: ENSG00000099364; HGNC ID: 25300 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.152149
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 5 / 70761 | 70 |  |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 3 / 564012 | 5 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 23 / 1939121 | 11 |  |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 1 / 17475 | 57 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 3 / 114246 | 26 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 5 / 119369 | 41 | |
| germ cell tumor | 5 / 263845 | 18 | |
| glioma | 4 / 106883 | 37 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 1 / 95842 | 10 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 1 / 71755 | 13 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 38 / 3360307 | 11 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 2 / 104616 | 19 | |
| primitive neuroectodermal tumor of the CNS | 3 / 125680 | 23 | |
| prostate cancer | 1 / 102680 | 9 | |
| retinoblastoma | 1 / 46356 | 21 | |
| skin tumor | 4 / 124949 | 32 | |
| soft tissue/muscle tissue tumor | 2 / 125191 | 15 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 1 / 71655 | 13 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 12 / 1100989 | 10 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 1 / 149255 | 6 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 9 / 215722 | 41 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 4 / 211054 | 18 | |
| heart | 0 / 89626 | 0 | |
| intestine | 6 / 234472 | 25 | |
| kidney | 0 / 211777 | 0 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 2 / 336974 | 5 | |
| lymph | 1 / 44270 | 22 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 1 / 153271 | 6 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 6 / 214812 | 27 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 4 / 280825 | 14 | |
| prostate | 1 / 189345 | 5 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 5 / 210574 | 23 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 1 / 96619 | 10 | |
| testis | 5 / 330442 | 15 | |
| thymus | 2 / 81131 | 24 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 3 / 232878 | 12 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_23_P338168
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 7.6 ± 0.59 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 7.34 ± 0.15 | |
| Basal Part of Pons | 7.41 ± 0.39 | |
| Cerebellar Cortex | 6.93 ± 0.29 | |
| Cerebellar Nuclei | 7.48 ± 0.27 | |
| Claustrum | 7.66 ± 0.45 | |
| Epithalamus | 6.42 ± 0.43 | |
| Frontal Lobe | 7.34 ± 0.52 | |
| Globus Pallidus | 7.43 ± 0.33 | |
| Hypothalamus | 6.97 ± 0.56 | |
| Insula | 7.18 ± 0.43 | |
| Limbic Lobe | 7.36 ± 0.43 | |
| Mesencephalon | 7.23 ± 0.37 | |
| Myelencephalon | 7.32 ± 0.48 | |
| Occipital Lobe | 7.21 ± 0.42 | |
| Parietal Lobe | 7.28 ± 0.39 | |
| Pontine Tegmentum | 7.21 ± 0.36 | |
| Striatum | 7.56 ± 0.42 | |
| Subthalamus | 7.21 ± 0.05 | |
| Temporal Lobe | 7.22 ± 0.43 | |
| Thalamus | 7.44 ± 0.33 | |
| White Matter | 6.98 ± 0.17 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Fbxl19 | CB | Cerebellum | 37.24 | |
| 45.26 | | |||
| Fbxl19 | CTX | Cerebral cortex | 73.26 | |
| 52.78 | | |||
| Fbxl19 | HIP | Hippocampal region | 43.66 | |
| 52.13 | | |||
| Fbxl19 | HPF | Hippocampal formation | 54.5 | |
| 54.73 | | |||
| Fbxl19 | HY | Hypothalamus | 32.27 | |
| 23.07 | | |||
| Fbxl19 | LSX | Lateral septal complex | 38.64 | |
| 26.2 | | |||
| Fbxl19 | MB | Midbrain | 24.8 | |
| 21.13 | | |||
| Fbxl19 | MY | Medulla | 25.7 | |
| 23.65 | | |||
| Fbxl19 | OLF | Olfactory bulb | 79.57 | |
| 65.95 | | |||
| Fbxl19 | P | Pons | 23.41 | |
| 20.72 | | |||
| Fbxl19 | PAL | Pallidum | 23.18 | |
| 17.31 | | |||
| Fbxl19 | RHP | Retrohippocampal region | 73.34 | |
| 59.4 | | |||
| Fbxl19 | sAMY | Striatum-like amygdalar nuclei | 44.35 | |
| 29.99 | | |||
| Fbxl19 | STR | Striatum | 49.62 | |
| 33.55 | | |||
| Fbxl19 | STRd | Striatum dorsal region | 50.33 | |
| 34.1 | | |||
| Fbxl19 | STRv | Striatum ventral region | 55.97 | |
| 36.88 | | |||
| Fbxl19 | TH | Thalamus | 16.89 | |
| 13.77 | |