AutismKB 2.0

Annotation Detail for PPARD


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Basic Information Top
Gene Symbol:PPARD ( FAAR,MGC3931,NR1C2,NUC1,NUCI,NUCII,PPARB )
Gene Full Name: peroxisome proliferator-activated receptor delta
Band: 6p21.31
Quick LinksEntrez ID:5467; OMIM: 600409; Uniprot ID:PPARD_HUMAN; ENSEMBL ID: ENSG00000112033; HGNC ID: 9235
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body4 / 7076156
blastocyst2 / 6231932
fetus9 / 56401215
neonate4 / 31097128
infant1 / 2362042
juvenile1 / 5555617
adult83 / 193912142
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma1 / 1747557
breast (mammary gland) tumor2 / 9417821
cervical tumor0 / 343660 
chondrosarcoma4 / 8282348
colorectal tumor2 / 11424617
esophageal tumor0 / 172900 
gastrointestinal tumor1 / 1193698
germ cell tumor12 / 26384545
glioma1 / 1068839
head and neck tumor6 / 13630244
kidney tumor2 / 6895929
leukemia1 / 9584210
liver tumor0 / 963590 
lung tumor1 / 1031279
lymphoma0 / 717550 
non-neoplasia1 / 9725010
normal155 / 336030746
ovarian tumor10 / 76682130
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS6 / 12568047
prostate cancer9 / 10268087
retinoblastoma0 / 463560 
skin tumor2 / 12494916
soft tissue/muscle tissue tumor3 / 12519123
uterine tumor3 / 9025733
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland1 / 3319730
ascites1 / 4001524
bladder1 / 2975733
blood4 / 12347832
bone1 / 7165513
bone marrow0 / 488010 
brain74 / 110098967
cervix0 / 481710 
connective tissue3 / 14925520
ear0 / 162120 
embryonic tissue10 / 21572246
esophagus0 / 202090 
eye1 / 2110544
heart0 / 896260 
intestine7 / 23447229
kidney7 / 21177733
larynx1 / 2414541
liver2 / 2077439
lung10 / 33697429
lymph0 / 442700 
lymph node1 / 9161010
mammary gland6 / 15327139
mouth3 / 6705244
muscle2 / 10771518
nerve1 / 1576863
ovary11 / 102051107
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx1 / 4132824
pituitary gland0 / 165850 
placenta29 / 280825103
prostate11 / 18934558
salivary gland1 / 2015549
skin9 / 21057442
spleen4 / 5395274
stomach0 / 966190 
testis8 / 33044224
thymus4 / 8113149
thyroid3 / 4747363
tonsil0 / 169990 
trachea3 / 5241357
umbilical cord2 / 13680146
uterus12 / 23287851
vascular2 / 5178038
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 208044_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts27.15
Adipocyte21
AdrenalCortex22.45
Adrenalgland20.4
Amygdala22.7
Appendix15.1
AtrioventricularNode24.85
BDCA4+_DentriticCells17.1
Bonemarrow20.55
BronchialEpithelialCells21.2
CD105+_Endothelial19.5
CD14+_Monocytes22.65
CD19+_BCells(neg._sel.)26.8
CD33+_Myeloid21.15
CD34+15.65
CD4+_Tcells23.65
CD56+_NKCells22.15
CD71+_EarlyErythroid19.7
CD8+_Tcells21.1
CardiacMyocytes27.7
Caudatenucleus19
Cerebellum19.35
CerebellumPeduncles24.9
CiliaryGanglion24.8
CingulateCortex25.75
Colorectaladenocarcinoma32.9
DorsalRootGanglion17.55
FetalThyroid22.65
Fetalbrain21.3
Fetalliver18
Fetallung17.75
GlobusPallidus23.1
Heart27.25
Hypothalamus22.65
Kidney17.1
Leukemia_chronicMyelogenousK-56219.1
Leukemia_promyelocytic-HL-6017.15
Leukemialymphoblastic(MOLT-4)15.5
Liver26.7
Lung23.7
Lymphnode18.5
Lymphoma_burkitts(Daudi)26.8
Lymphoma_burkitts(Raji)29.65
MedullaOblongata17.55
OccipitalLobe19.2
OlfactoryBulb16.75
Ovary13.85
Pancreas17.65
PancreaticIslet21.2
ParietalLobe22.7
Pituitary24.75
Placenta37.35
Pons20.2
PrefrontalCortex38.8
Prostate25
Salivarygland16.05
SkeletalMuscle23.85
Skin17.55
SmoothMuscle24.05
Spinalcord22.8
SubthalamicNucleus23.25
SuperiorCervicalGanglion24.15
TemporalLobe19.1
Testis18.3
TestisGermCell13.5
TestisIntersitial16.15
TestisLeydigCell20.95
TestisSeminiferousTubule18.15
Thalamus21.9
Thymus14
Thyroid30.65
Tongue20.8
Tonsil19.95
Trachea17.75
TrigeminalGanglion21.35
Uterus17.5
UterusCorpus18.65
WholeBlood18.65
Wholebrain18.05
colon20.5
pineal_day27.68
pineal_night36.08
retina35.85
small_intestine16.55
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_24_P252130
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala9.58 ± 0.32
Basal Forebrain9.17 ± 0.18
Basal Part of Pons9.71 ± 0.27
Cerebellar Cortex9.26 ± 0.27
Cerebellar Nuclei9.53 ± 0.44
Claustrum9.95 ± 0.6
Epithalamus9 ± 0.25
Frontal Lobe9.49 ± 0.39
Globus Pallidus9.64 ± 0.28
Hypothalamus8.8 ± 0.14
Insula9.34 ± 0.29
Limbic Lobe9.74 ± 0.55
Mesencephalon9.34 ± 0.31
Myelencephalon9.5 ± 0.43
Occipital Lobe10.06 ± 0.64
Parietal Lobe9.64 ± 0.39
Pontine Tegmentum9.41 ± 0.44
Striatum9.39 ± 0.35
Subthalamus9.26 ± 0.39
Temporal Lobe9.4 ± 0.33
Thalamus9.5 ± 0.34
White Matter9.76 ± 0.43
Mouse Brain ISH
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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