Annotation Detail for KLHL28
Basic Information Top
| Gene Symbol: | KLHL28 ( BTBD5,FLJ20081 ) |
|---|---|
| Gene Full Name: | kelch-like 28 (Drosophila) |
| Band: | 14q21.2 |
| Quick Links | Entrez ID:54813; OMIM: NA; Uniprot ID:KLH28_HUMAN; ENSEMBL ID: ENSG00000179454; HGNC ID: 19741 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.550906
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 2 / 70761 | 28 |  |
| blastocyst | 1 / 62319 | 16 | |
| fetus | 23 / 564012 | 40 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 38 / 1939121 | 19 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 |  |
| cervical tumor | 1 / 34366 | 29 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 1 / 114246 | 8 | |
| esophageal tumor | 3 / 17290 | 173 |  |
| gastrointestinal tumor | 2 / 119369 | 16 | |
| germ cell tumor | 3 / 263845 | 11 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 12 / 136302 | 88 | |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 1 / 95842 | 10 | |
| liver tumor | 1 / 96359 | 10 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 93 / 3360307 | 27 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 2 / 125680 | 15 | |
| prostate cancer | 4 / 102680 | 38 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 2 / 125191 | 15 | |
| uterine tumor | 2 / 90257 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 1 / 29757 | 33 | |
| blood | 1 / 123478 | 8 | |
| bone | 1 / 71655 | 13 | |
| bone marrow | 3 / 48801 | 61 | |
| brain | 23 / 1100989 | 20 | |
| cervix | 1 / 48171 | 20 | |
| connective tissue | 1 / 149255 | 6 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 11 / 215722 | 50 | |
| esophagus | 3 / 20209 | 148 | |
| eye | 3 / 211054 | 14 | |
| heart | 0 / 89626 | 0 | |
| intestine | 4 / 234472 | 17 | |
| kidney | 5 / 211777 | 23 | |
| larynx | 0 / 24145 | 0 | |
| liver | 2 / 207743 | 9 | |
| lung | 1 / 336974 | 2 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 5 / 91610 | 54 | |
| mammary gland | 8 / 153271 | 52 | |
| mouth | 11 / 67052 | 164 | |
| muscle | 3 / 107715 | 27 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 2 / 214812 | 9 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 6 / 280825 | 21 | |
| prostate | 5 / 189345 | 26 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 3 / 210574 | 14 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 3 / 96619 | 31 | |
| testis | 9 / 330442 | 27 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 2 / 52413 | 38 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 3 / 232878 | 12 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: CUST_2188_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 6.76 ± 0.45 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 7.13 ± 0.19 | |
| Basal Part of Pons | 7.16 ± 0.43 | |
| Cerebellar Cortex | 7.66 ± 0.19 | |
| Cerebellar Nuclei | 7.31 ± 0.21 | |
| Claustrum | 6.93 ± 0.62 | |
| Epithalamus | 7.59 ± 0.45 | |
| Frontal Lobe | 7.39 ± 0.33 | |
| Globus Pallidus | 6.8 ± 0.3 | |
| Hypothalamus | 7.51 ± 0.24 | |
| Insula | 7.29 ± 0.35 | |
| Limbic Lobe | 7.04 ± 0.54 | |
| Mesencephalon | 7.21 ± 0.47 | |
| Myelencephalon | 7.14 ± 0.49 | |
| Occipital Lobe | 6.86 ± 0.58 | |
| Parietal Lobe | 7.21 ± 0.45 | |
| Pontine Tegmentum | 7.25 ± 0.47 | |
| Striatum | 6.62 ± 0.41 | |
| Subthalamus | 7.22 ± 0.67 | |
| Temporal Lobe | 7.27 ± 0.38 | |
| Thalamus | 7.09 ± 0.44 | |
| White Matter | 7.81 ± 0.33 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Btbd5 | CB | Cerebellum | 7.79 | |
| 9.47 | | |||
| Btbd5 | CTX | Cerebral cortex | 30.43 | |
| 24.04 | | |||
| Btbd5 | HIP | Hippocampal region | 17.99 | |
| 23.23 | | |||
| Btbd5 | HPF | Hippocampal formation | 13.99 | |
| 16.15 | | |||
| Btbd5 | HY | Hypothalamus | 2.35 | |
| 2.28 | | |||
| Btbd5 | LSX | Lateral septal complex | 6.57 | |
| 4.99 | | |||
| Btbd5 | MB | Midbrain | 8.06 | |
| 8.82 | | |||
| Btbd5 | MY | Medulla | 4.44 | |
| 5.59 | | |||
| Btbd5 | OLF | Olfactory bulb | 20.6 | |
| 16.77 | | |||
| Btbd5 | P | Pons | 3.2 | |
| 5.12 | | |||
| Btbd5 | PAL | Pallidum | 2.73 | |
| 2.67 | | |||
| Btbd5 | RHP | Retrohippocampal region | 5.73 | |
| 4.71 | | |||
| Btbd5 | sAMY | Striatum-like amygdalar nuclei | 4.16 | |
| 4 | | |||
| Btbd5 | STR | Striatum | 5.35 | |
| 4.37 | | |||
| Btbd5 | STRd | Striatum dorsal region | 4.77 | |
| 3.91 | | |||
| Btbd5 | STRv | Striatum ventral region | 7.13 | |
| 5.32 | | |||
| Btbd5 | TH | Thalamus | 12.45 | |
| 12.42 | |