AutismKB 2.0

Annotation Detail for PIGG


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Basic Information Top
Gene Symbol:PIGG ( DKFZp434A1810,DKFZp434C1712,DKFZp434M1131,FLJ20265,FLJ39925,GPI7,LAS21,MGC131903,PRO4405,RLGS1930 )
Gene Full Name: phosphatidylinositol glycan anchor biosynthesis, class G
Band: 4p16.3
Quick LinksEntrez ID:54872; OMIM: NA; Uniprot ID:PIGG_HUMAN; ENSEMBL ID: ENSG00000174227; HGNC ID: 25985
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body2 / 7076128
blastocyst1 / 6231916
fetus23 / 56401240
neonate2 / 3109764
infant0 / 236200 
juvenile2 / 5555635
adult113 / 193912158
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma0 / 174750 
breast (mammary gland) tumor6 / 9417863
cervical tumor1 / 3436629
chondrosarcoma6 / 8282372
colorectal tumor3 / 11424626
esophageal tumor0 / 172900 
gastrointestinal tumor3 / 11936925
germ cell tumor44 / 263845166
glioma5 / 10688346
head and neck tumor7 / 13630251
kidney tumor3 / 6895943
leukemia3 / 9584231
liver tumor2 / 9635920
lung tumor2 / 10312719
lymphoma2 / 7175527
non-neoplasia7 / 9725071
normal204 / 336030760
ovarian tumor1 / 7668213
pancreatic tumor2 / 10461619
primitive neuroectodermal tumor of the CNS3 / 12568023
prostate cancer5 / 10268048
retinoblastoma1 / 4635621
skin tumor2 / 12494916
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor9 / 9025799
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland1 / 3319730
ascites0 / 400150 
bladder1 / 2975733
blood3 / 12347824
bone5 / 7165569
bone marrow0 / 488010 
brain99 / 110098989
cervix1 / 4817120
connective tissue13 / 14925587
ear1 / 1621261
embryonic tissue10 / 21572246
esophagus0 / 202090 
eye10 / 21105447
heart2 / 8962622
intestine5 / 23447221
kidney17 / 21177780
larynx2 / 2414582
liver12 / 20774357
lung10 / 33697429
lymph1 / 4427022
lymph node2 / 9161021
mammary gland7 / 15327145
mouth4 / 6705259
muscle2 / 10771518
nerve0 / 157680 
ovary1 / 1020519
pancreas2 / 2148129
parathyroid3 / 20539146
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta13 / 28082546
prostate7 / 18934536
salivary gland0 / 201550 
skin8 / 21057437
spleen3 / 5395255
stomach6 / 9661962
testis57 / 330442172
thymus10 / 81131123
thyroid4 / 4747384
tonsil0 / 169990 
trachea9 / 52413171
umbilical cord1 / 1368073
uterus18 / 23287877
vascular10 / 51780193
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 218652_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts16.4
Adipocyte10
AdrenalCortex8.05
Adrenalgland6.95
Amygdala25.4
Appendix5.5
AtrioventricularNode6.05
BDCA4+_DentriticCells32.4
Bonemarrow7.75
BronchialEpithelialCells8.85
CD105+_Endothelial13.8
CD14+_Monocytes9.6
CD19+_BCells(neg._sel.)10.8
CD33+_Myeloid20.05
CD34+28.45
CD4+_Tcells35.65
CD56+_NKCells15.3
CD71+_EarlyErythroid7.8
CD8+_Tcells47.7
CardiacMyocytes6.5
Caudatenucleus8
Cerebellum6.55
CerebellumPeduncles8.65
CiliaryGanglion5.45
CingulateCortex7.8
Colorectaladenocarcinoma10.55
DorsalRootGanglion3.9
FetalThyroid11.05
Fetalbrain14.05
Fetalliver7.1
Fetallung8.9
GlobusPallidus5.5
Heart7.7
Hypothalamus21.25
Kidney6.35
Leukemia_chronicMyelogenousK-5628.05
Leukemia_promyelocytic-HL-609.2
Leukemialymphoblastic(MOLT-4)8.9
Liver8.3
Lung23.8
Lymphnode22.3
Lymphoma_burkitts(Daudi)9.5
Lymphoma_burkitts(Raji)92.75
MedullaOblongata7.15
OccipitalLobe9.55
OlfactoryBulb12.35
Ovary4.95
Pancreas5.95
PancreaticIslet10.6
ParietalLobe8.15
Pituitary10.65
Placenta17.1
Pons6.9
PrefrontalCortex25.8
Prostate38.95
Salivarygland8.65
SkeletalMuscle8.1
Skin5.95
SmoothMuscle7.15
Spinalcord21.55
SubthalamicNucleus7.8
SuperiorCervicalGanglion6.25
TemporalLobe5.65
Testis7.8
TestisGermCell17.45
TestisIntersitial6.15
TestisLeydigCell5.55
TestisSeminiferousTubule6.5
Thalamus8.35
Thymus10.55
Thyroid44.85
Tongue6.05
Tonsil7.5
Trachea7.75
TrigeminalGanglion7.75
Uterus24.1
UterusCorpus5.25
WholeBlood10.15
Wholebrain19.5
colon10.1
pineal_day23.38
pineal_night19.92
retina27
small_intestine12.55
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P136547
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala7.38 ± 0.45
Basal Forebrain7.36 ± 0.11
Basal Part of Pons7.46 ± 0.41
Cerebellar Cortex7.74 ± 0.24
Cerebellar Nuclei7.5 ± 0.24
Claustrum6.83 ± 0.5
Epithalamus7.74 ± 0.25
Frontal Lobe7.54 ± 0.31
Globus Pallidus7.53 ± 0.31
Hypothalamus7.37 ± 0.26
Insula7.54 ± 0.26
Limbic Lobe7.64 ± 0.35
Mesencephalon7.43 ± 0.36
Myelencephalon7.5 ± 0.36
Occipital Lobe7.65 ± 0.32
Parietal Lobe7.42 ± 0.35
Pontine Tegmentum7.46 ± 0.37
Striatum7.41 ± 0.25
Subthalamus7.1 ± 0.55
Temporal Lobe7.55 ± 0.3
Thalamus7.36 ± 0.27
White Matter8.43 ± 0.45
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
PiggCBCerebellum7.41
9.01
PiggCTXCerebral cortex0.56
0.72
PiggHIPHippocampal region0.88
0.75
PiggHPFHippocampal formation0.7
0.65
PiggHYHypothalamus0.1
0.13
PiggLSXLateral septal complex0.07
0.13
PiggMBMidbrain0.34
0.52
PiggMYMedulla1.71
2.14
PiggOLFOlfactory bulb0.98
1.84
PiggPPons0.64
0.91
PiggPALPallidum0.17
0.13
PiggRHPRetrohippocampal region0.39
0.52
PiggsAMYStriatum-like amygdalar nuclei0.31
0.32
PiggSTRStriatum0.11
0.11
PiggSTRdStriatum dorsal region0.04
0.05
PiggSTRvStriatum ventral region0.21
0.14
PiggTHThalamus0.42
0.45
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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