AutismKB 2.0

Annotation Detail for ST7L


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Basic Information Top
Gene Symbol:ST7L ( FAM4B,FLJ11657,FLJ20284,ST7R,STLR )
Gene Full Name: suppression of tumorigenicity 7 like
Band: 1p13.2
Quick LinksEntrez ID:54879; OMIM: NA; Uniprot ID:ST7L_HUMAN; ENSEMBL ID: ENSG00000007341; HGNC ID: 18441
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body1 / 7076114
blastocyst1 / 6231916
fetus19 / 56401233
neonate0 / 310970 
infant1 / 2362042
juvenile2 / 5555635
adult42 / 193912121
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor3 / 9417831
cervical tumor0 / 343660 
chondrosarcoma4 / 8282348
colorectal tumor2 / 11424617
esophageal tumor0 / 172900 
gastrointestinal tumor1 / 1193698
germ cell tumor5 / 26384518
glioma6 / 10688356
head and neck tumor1 / 1363027
kidney tumor1 / 6895914
leukemia1 / 9584210
liver tumor3 / 9635931
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia1 / 9725010
normal113 / 336030733
ovarian tumor3 / 7668239
pancreatic tumor1 / 1046169
primitive neuroectodermal tumor of the CNS5 / 12568039
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor5 / 12519139
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland1 / 3319730
ascites0 / 400150 
bladder0 / 297570 
blood7 / 12347856
bone2 / 7165527
bone marrow0 / 488010 
brain35 / 110098931
cervix0 / 481710 
connective tissue10 / 14925566
ear0 / 162120 
embryonic tissue6 / 21572227
esophagus0 / 202090 
eye8 / 21105437
heart0 / 896260 
intestine7 / 23447229
kidney4 / 21177718
larynx0 / 241450 
liver7 / 20774333
lung9 / 33697426
lymph0 / 442700 
lymph node0 / 916100 
mammary gland3 / 15327119
mouth1 / 6705214
muscle1 / 1077159
nerve1 / 1576863
ovary4 / 10205139
pancreas6 / 21481227
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta3 / 28082510
prostate2 / 18934510
salivary gland0 / 201550 
skin4 / 21057418
spleen0 / 539520 
stomach0 / 966190 
testis47 / 330442142
thymus3 / 8113136
thyroid0 / 474730 
tonsil0 / 169990 
trachea2 / 5241338
umbilical cord0 / 136800 
uterus2 / 2328788
vascular1 / 5178019
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 219964_at
Cell line Expression level Expression bar
721_B_lymphoblasts6.25
Adipocyte5.2
AdrenalCortex5.8
Adrenalgland6.3
Amygdala5.45
Appendix5.25
AtrioventricularNode4.4
BDCA4+_DentriticCells5.55
Bonemarrow5.5
BronchialEpithelialCells5.1
CD105+_Endothelial5.2
CD14+_Monocytes5.5
CD19+_BCells(neg._sel.)5.65
CD33+_Myeloid6.45
CD34+6.55
CD4+_Tcells5.4
CD56+_NKCells5.95
CD71+_EarlyErythroid4.9
CD8+_Tcells5
CardiacMyocytes6.65
Caudatenucleus4.75
Cerebellum4.3
CerebellumPeduncles6.15
CiliaryGanglion4.05
CingulateCortex5.35
Colorectaladenocarcinoma5.25
DorsalRootGanglion4.35
FetalThyroid5.1
Fetalbrain5.35
Fetalliver4.65
Fetallung4.3
GlobusPallidus3.9
Heart6.6
Hypothalamus5.75
Kidney4.55
Leukemia_chronicMyelogenousK-5624.75
Leukemia_promyelocytic-HL-606.05
Leukemialymphoblastic(MOLT-4)4.2
Liver6.9
Lung5.75
Lymphnode6
Lymphoma_burkitts(Daudi)6.75
Lymphoma_burkitts(Raji)7.5
MedullaOblongata4.8
OccipitalLobe4.75
OlfactoryBulb4.15
Ovary5.15
Pancreas4.25
PancreaticIslet7.5
ParietalLobe5.8
Pituitary6.15
Placenta5.3
Pons5.05
PrefrontalCortex6.35
Prostate6
Salivarygland4.35
SkeletalMuscle6.75
Skin4.4
SmoothMuscle5.85
Spinalcord5.6
SubthalamicNucleus4.75
SuperiorCervicalGanglion6.65
TemporalLobe4.8
Testis4.5
TestisGermCell4.35
TestisIntersitial4.45
TestisLeydigCell5.5
TestisSeminiferousTubule4.9
Thalamus5.35
Thymus4.2
Thyroid6.4
Tongue7.1
Tonsil5.1
Trachea4.4
TrigeminalGanglion5.5
Uterus4.25
UterusCorpus5
WholeBlood5.75
Wholebrain4.5
colon5.3
pineal_day6.46
pineal_night6.34
retina6.325
small_intestine5.05
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_5711_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala6.25 ± 0.37
Basal Forebrain6.46 ± 0.13
Basal Part of Pons6.1 ± 0.29
Cerebellar Cortex6.51 ± 0.17
Cerebellar Nuclei6.12 ± 0.25
Claustrum6.12 ± 0.36
Epithalamus6.72 ± 0.16
Frontal Lobe6.01 ± 0.27
Globus Pallidus6.43 ± 0.32
Hypothalamus6.21 ± 0.24
Insula6.1 ± 0.26
Limbic Lobe6.11 ± 0.34
Mesencephalon6.15 ± 0.36
Myelencephalon6.2 ± 0.39
Occipital Lobe6.5 ± 0.38
Parietal Lobe6.25 ± 0.37
Pontine Tegmentum6.19 ± 0.32
Striatum6.24 ± 0.41
Subthalamus6.26 ± 0.1
Temporal Lobe6.16 ± 0.27
Thalamus6.2 ± 0.29
White Matter7.01 ± 0.42
Mouse Brain ISH
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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