Annotation Detail for UHRF1BP1
Basic Information Top
| Gene Symbol: | UHRF1BP1 ( C6orf107,FLJ20302,ICBP90,dJ349A12.1 ) |
|---|---|
| Gene Full Name: | UHRF1 binding protein 1 |
| Band: | 6p21.31 |
| Quick Links | Entrez ID:54887; OMIM: NA; Uniprot ID:URFB1_HUMAN; ENSEMBL ID: ENSG00000065060; HGNC ID: 21216 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.700656
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 4 / 70761 | 56 |  |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 13 / 564012 | 23 |  |
| neonate | 1 / 31097 | 32 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 52 / 1939121 | 26 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 13 / 94178 | 138 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 2 / 114246 | 17 | |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 5 / 119369 | 41 | |
| germ cell tumor | 6 / 263845 | 22 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 1 / 136302 | 7 |  |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 2 / 95842 | 20 | |
| liver tumor | 3 / 96359 | 31 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 73 / 3360307 | 21 | |
| ovarian tumor | 2 / 76682 | 26 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 5 / 125680 | 39 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 3 / 46356 | 64 | |
| skin tumor | 4 / 124949 | 32 | |
| soft tissue/muscle tissue tumor | 2 / 125191 | 15 | |
| uterine tumor | 3 / 90257 | 33 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 3 / 40015 | 74 | |
| bladder | 1 / 29757 | 33 | |
| blood | 3 / 123478 | 24 | |
| bone | 2 / 71655 | 27 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 17 / 1100989 | 15 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 5 / 215722 | 23 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 9 / 211054 | 42 | |
| heart | 0 / 89626 | 0 | |
| intestine | 8 / 234472 | 34 | |
| kidney | 0 / 211777 | 0 | |
| larynx | 0 / 24145 | 0 | |
| liver | 6 / 207743 | 28 | |
| lung | 9 / 336974 | 26 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 5 / 91610 | 54 | |
| mammary gland | 17 / 153271 | 110 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 2 / 214812 | 9 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 6 / 280825 | 21 | |
| prostate | 1 / 189345 | 5 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 6 / 210574 | 28 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 0 / 96619 | 0 | |
| testis | 19 / 330442 | 57 | |
| thymus | 4 / 81131 | 49 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 1 / 52413 | 19 | |
| umbilical cord | 1 / 13680 | 73 | |
| uterus | 5 / 232878 | 21 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_23_P145370
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 3.43 ± 0.77 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 3.47 ± 0.52 | |
| Basal Part of Pons | 3.2 ± 0.44 | |
| Cerebellar Cortex | 3.84 ± 0.35 | |
| Cerebellar Nuclei | 3.51 ± 0.53 | |
| Claustrum | 3.61 ± 0.65 | |
| Epithalamus | 3.27 ± 0.64 | |
| Frontal Lobe | 3.22 ± 0.65 | |
| Globus Pallidus | 3.28 ± 0.34 | |
| Hypothalamus | 3.02 ± 0.51 | |
| Insula | 3.15 ± 0.91 | |
| Limbic Lobe | 3.16 ± 0.56 | |
| Mesencephalon | 3.57 ± 0.53 | |
| Myelencephalon | 3.34 ± 0.62 | |
| Occipital Lobe | 3.82 ± 0.63 | |
| Parietal Lobe | 3.51 ± 0.59 | |
| Pontine Tegmentum | 3.53 ± 0.86 | |
| Striatum | 3.11 ± 0.68 | |
| Subthalamus | 3.22 ± 0.88 | |
| Temporal Lobe | 3.42 ± 0.63 | |
| Thalamus | 3.56 ± 0.6 | |
| White Matter | 3.42 ± 0.77 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| F830021D11Rik | CB | Cerebellum | 9.08 | |
| 9.39 | | |||
| F830021D11Rik | CTX | Cerebral cortex | 27.8 | |
| 19.18 | | |||
| F830021D11Rik | HIP | Hippocampal region | 12.76 | |
| 11.94 | | |||
| F830021D11Rik | HPF | Hippocampal formation | 17.37 | |
| 14.89 | | |||
| F830021D11Rik | HY | Hypothalamus | 11.26 | |
| 7.62 | | |||
| F830021D11Rik | LSX | Lateral septal complex | 3.19 | |
| 2.02 | | |||
| F830021D11Rik | MB | Midbrain | 12.65 | |
| 11.36 | | |||
| F830021D11Rik | MY | Medulla | 23.66 | |
| 26.22 | | |||
| F830021D11Rik | OLF | Olfactory bulb | 21.47 | |
| 15.16 | | |||
| F830021D11Rik | P | Pons | 19.3 | |
| 20.42 | | |||
| F830021D11Rik | PAL | Pallidum | 10.85 | |
| 8.77 | | |||
| F830021D11Rik | RHP | Retrohippocampal region | 26.07 | |
| 19.71 | | |||
| F830021D11Rik | sAMY | Striatum-like amygdalar nuclei | 4.75 | |
| 3.2 | | |||
| F830021D11Rik | STR | Striatum | 5.24 | |
| 3.64 | | |||
| F830021D11Rik | STRd | Striatum dorsal region | 6.18 | |
| 4.5 | | |||
| F830021D11Rik | STRv | Striatum ventral region | 4.07 | |
| 2.44 | | |||
| F830021D11Rik | TH | Thalamus | 8.36 | |
| 6.22 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00495639 | 17 | 470 | 486 | VDDLDIHQVSTAGQPSK | Peptide Atlas |