AutismKB 2.0

Annotation Detail for TIPIN


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:TIPIN ( FLJ20516 )
Gene Full Name: TIMELESS interacting protein
Band: 15q22.31
Quick LinksEntrez ID:54962; OMIM: 610716; Uniprot ID:TIPIN_HUMAN; ENSEMBL ID: ENSG00000075131; HGNC ID: 30750
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body1 / 7076114
blastocyst0 / 623190 
fetus10 / 56401217
neonate3 / 3109796
infant0 / 236200 
juvenile0 / 555560 
adult30 / 193912115
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor3 / 12794234
bladder carcinoma6 / 17475343
breast (mammary gland) tumor3 / 9417831
cervical tumor1 / 3436629
chondrosarcoma0 / 828230 
colorectal tumor4 / 11424635
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor9 / 26384534
glioma1 / 1068839
head and neck tumor3 / 13630222
kidney tumor2 / 6895929
leukemia1 / 9584210
liver tumor1 / 9635910
lung tumor1 / 1031279
lymphoma0 / 717550 
non-neoplasia1 / 9725010
normal36 / 336030710
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer4 / 10268038
retinoblastoma5 / 46356107
skin tumor3 / 12494924
soft tissue/muscle tissue tumor3 / 12519123
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland3 / 3319790
ascites0 / 400150 
bladder7 / 29757235
blood1 / 1234788
bone3 / 7165541
bone marrow1 / 4880120
brain14 / 110098912
cervix1 / 4817120
connective tissue3 / 14925520
ear0 / 162120 
embryonic tissue2 / 2157229
esophagus0 / 202090 
eye5 / 21105423
heart1 / 8962611
intestine5 / 23447221
kidney7 / 21177733
larynx0 / 241450 
liver1 / 2077434
lung2 / 3369745
lymph0 / 442700 
lymph node0 / 916100 
mammary gland4 / 15327126
mouth3 / 6705244
muscle0 / 1077150 
nerve0 / 157680 
ovary0 / 1020510 
pancreas2 / 2148129
parathyroid0 / 205390 
pharynx1 / 4132824
pituitary gland0 / 165850 
placenta1 / 2808253
prostate5 / 18934526
salivary gland2 / 2015599
skin3 / 21057414
spleen1 / 5395218
stomach0 / 966190 
testis5 / 33044215
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord3 / 13680219
uterus1 / 2328784
vascular2 / 5178038
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 219258_at
Cell line Expression level Expression bar
721_B_lymphoblasts88.1
Adipocyte9.1
AdrenalCortex10.45
Adrenalgland8.05
Amygdala8.65
Appendix10.6
AtrioventricularNode7.75
BDCA4+_DentriticCells9.05
Bonemarrow9.25
BronchialEpithelialCells9.15
CD105+_Endothelial46.8
CD14+_Monocytes9.8
CD19+_BCells(neg._sel.)10.15
CD33+_Myeloid10.9
CD34+42.1
CD4+_Tcells9.35
CD56+_NKCells10.2
CD71+_EarlyErythroid8.85
CD8+_Tcells7.95
CardiacMyocytes13.15
Caudatenucleus8.2
Cerebellum7.55
CerebellumPeduncles11.05
CiliaryGanglion7.25
CingulateCortex9.5
Colorectaladenocarcinoma9.15
DorsalRootGanglion7.6
FetalThyroid9.05
Fetalbrain8.25
Fetalliver8.25
Fetallung6.95
GlobusPallidus7.05
Heart12.8
Hypothalamus9.3
Kidney7.9
Leukemia_chronicMyelogenousK-56217.5
Leukemia_promyelocytic-HL-6032
Leukemialymphoblastic(MOLT-4)25.85
Liver13.15
Lung9.95
Lymphnode7.8
Lymphoma_burkitts(Daudi)51.45
Lymphoma_burkitts(Raji)13.65
MedullaOblongata8.35
OccipitalLobe8.1
OlfactoryBulb6.6
Ovary6.35
Pancreas7.5
PancreaticIslet10.05
ParietalLobe10.15
Pituitary10.55
Placenta9.25
Pons9.1
PrefrontalCortex10.65
Prostate10.1
Salivarygland7.6
SkeletalMuscle11.6
Skin7.6
SmoothMuscle9.95
Spinalcord10.7
SubthalamicNucleus8.65
SuperiorCervicalGanglion11.4
TemporalLobe8.85
Testis32.5
TestisGermCell42.7
TestisIntersitial23.6
TestisLeydigCell21.05
TestisSeminiferousTubule13.45
Thalamus9.7
Thymus9.15
Thyroid10.5
Tongue9.5
Tonsil9.25
Trachea7.85
TrigeminalGanglion11.05
Uterus7.1
UterusCorpus8.65
WholeBlood9.9
Wholebrain7.25
colon9.85
pineal_day11.88
pineal_night11.5
retina11.275
small_intestine9.2
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_1567_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala5.19 ± 0.49
Basal Forebrain4.98 ± 0.24
Basal Part of Pons4.66 ± 0.49
Cerebellar Cortex5.18 ± 0.22
Cerebellar Nuclei4.84 ± 0.38
Claustrum4.89 ± 0.61
Epithalamus5.47 ± 0.52
Frontal Lobe4.79 ± 0.41
Globus Pallidus5.48 ± 0.63
Hypothalamus4.78 ± 0.25
Insula4.79 ± 0.37
Limbic Lobe4.93 ± 0.42
Mesencephalon4.98 ± 0.42
Myelencephalon4.87 ± 0.45
Occipital Lobe4.98 ± 0.37
Parietal Lobe4.88 ± 0.39
Pontine Tegmentum5.03 ± 0.37
Striatum4.75 ± 0.42
Subthalamus4.9 ± 0.46
Temporal Lobe4.87 ± 0.39
Thalamus4.86 ± 0.36
White Matter5.52 ± 0.31
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
TipinCBCerebellum5.82
6.78
TipinCTXCerebral cortex24.02
16.11
TipinHIPHippocampal region14.5
13.06
TipinHPFHippocampal formation16.62
13.87
TipinHYHypothalamus13.27
10.58
TipinLSXLateral septal complex11.73
9.09
TipinMBMidbrain5.17
5.02
TipinMYMedulla11.62
12.73
TipinOLFOlfactory bulb36.76
27.38
TipinPPons13.56
15.17
TipinPALPallidum10.57
10.45
TipinRHPRetrohippocampal region22.88
16.8
TipinsAMYStriatum-like amygdalar nuclei23.29
15.71
TipinSTRStriatum13.74
10.28
TipinSTRdStriatum dorsal region9.75
7.04
TipinSTRvStriatum ventral region19.02
14.57
TipinTHThalamus6.47
4.89
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved