AutismKB 2.0

Annotation Detail for OXR1


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Basic Information Top
Gene Symbol:OXR1 ( FLJ10125,FLJ38829,FLJ40849,FLJ41673,FLJ42450,FLJ45656 )
Gene Full Name: oxidation resistance 1
Band: 8q23.1
Quick LinksEntrez ID:55074; OMIM: 605609; Uniprot ID:OXR1_HUMAN; ENSEMBL ID: ENSG00000164830; HGNC ID: 15822
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body6 / 7076184
blastocyst2 / 6231932
fetus27 / 56401247
neonate5 / 31097160
infant8 / 23620338
juvenile2 / 5555635
adult74 / 193912138
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor3 / 12794234
bladder carcinoma2 / 17475114
breast (mammary gland) tumor5 / 9417853
cervical tumor1 / 3436629
chondrosarcoma1 / 8282312
colorectal tumor2 / 11424617
esophageal tumor1 / 1729057
gastrointestinal tumor6 / 11936950
germ cell tumor12 / 26384545
glioma2 / 10688318
head and neck tumor6 / 13630244
kidney tumor13 / 68959188
leukemia4 / 9584241
liver tumor4 / 9635941
lung tumor0 / 1031270 
lymphoma3 / 7175541
non-neoplasia8 / 9725082
normal247 / 336030773
ovarian tumor0 / 766820 
pancreatic tumor4 / 10461638
primitive neuroectodermal tumor of the CNS15 / 125680119
prostate cancer4 / 10268038
retinoblastoma1 / 4635621
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor4 / 12519131
uterine tumor4 / 9025744
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland4 / 33197120
ascites0 / 400150 
bladder2 / 2975767
blood1 / 1234788
bone3 / 7165541
bone marrow4 / 4880181
brain157 / 1100989142
cervix1 / 4817120
connective tissue2 / 14925513
ear0 / 162120 
embryonic tissue10 / 21572246
esophagus1 / 2020949
eye17 / 21105480
heart7 / 8962678
intestine6 / 23447225
kidney22 / 211777103
larynx2 / 2414582
liver8 / 20774338
lung14 / 33697441
lymph2 / 4427045
lymph node3 / 9161032
mammary gland8 / 15327152
mouth4 / 6705259
muscle5 / 10771546
nerve0 / 157680 
ovary1 / 1020519
pancreas9 / 21481241
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta14 / 28082549
prostate8 / 18934542
salivary gland1 / 2015549
skin6 / 21057428
spleen0 / 539520 
stomach5 / 9661951
testis38 / 330442114
thymus3 / 8113136
thyroid0 / 474730 
tonsil0 / 169990 
trachea34 / 52413648
umbilical cord1 / 1368073
uterus10 / 23287842
vascular3 / 5178057
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 218197_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts11.4
Adipocyte9.75
AdrenalCortex12.6
Adrenalgland8.9
Amygdala213.8
Appendix11.05
AtrioventricularNode9.4
BDCA4+_DentriticCells37.4
Bonemarrow10.15
BronchialEpithelialCells8.4
CD105+_Endothelial9.85
CD14+_Monocytes10.5
CD19+_BCells(neg._sel.)35.1
CD33+_Myeloid20.65
CD34+12.05
CD4+_Tcells10
CD56+_NKCells15.35
CD71+_EarlyErythroid8.85
CD8+_Tcells9.2
CardiacMyocytes13.95
Caudatenucleus10.65
Cerebellum8.25
CerebellumPeduncles11.8
CiliaryGanglion7.75
CingulateCortex34.05
Colorectaladenocarcinoma137.9
DorsalRootGanglion8.35
FetalThyroid10.45
Fetalbrain9.85
Fetalliver8.85
Fetallung7.75
GlobusPallidus46.6
Heart13.75
Hypothalamus26.55
Kidney8.35
Leukemia_chronicMyelogenousK-5627.65
Leukemia_promyelocytic-HL-6013.7
Leukemialymphoblastic(MOLT-4)9
Liver14
Lung9
Lymphnode7.65
Lymphoma_burkitts(Daudi)11.85
Lymphoma_burkitts(Raji)41.2
MedullaOblongata11.45
OccipitalLobe91.65
OlfactoryBulb34.35
Ovary6.7
Pancreas8.15
PancreaticIslet9.95
ParietalLobe37.35
Pituitary11.55
Placenta8
Pons11.45
PrefrontalCortex160.85
Prostate10.7
Salivarygland8.25
SkeletalMuscle13.25
Skin8.25
SmoothMuscle11.15
Spinalcord10.65
SubthalamicNucleus62
SuperiorCervicalGanglion12.55
TemporalLobe24.5
Testis7.95
TestisGermCell11.15
TestisIntersitial8.65
TestisLeydigCell9.85
TestisSeminiferousTubule8.5
Thalamus25.85
Thymus7.1
Thyroid24.9
Tongue10.3
Tonsil9
Trachea19.7
TrigeminalGanglion11.15
Uterus19.9
UterusCorpus9.15
WholeBlood10.95
Wholebrain66.45
colon10.1
pineal_day169.18
pineal_night168.86
retina10.45
small_intestine8.9
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_24_P163632
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala10.65 ± 0.39
Basal Forebrain9.66 ± 0.42
Basal Part of Pons11.53 ± 0.28
Cerebellar Cortex10.67 ± 0.24
Cerebellar Nuclei10.5 ± 0.49
Claustrum10.92 ± 0.32
Epithalamus9.78 ± 0.8
Frontal Lobe10.75 ± 0.47
Globus Pallidus9.36 ± 0.71
Hypothalamus10.11 ± 0.6
Insula10.65 ± 0.27
Limbic Lobe10.76 ± 0.53
Mesencephalon10.08 ± 0.8
Myelencephalon10.42 ± 0.77
Occipital Lobe10.41 ± 0.58
Parietal Lobe10.7 ± 0.45
Pontine Tegmentum10.33 ± 0.55
Striatum8.8 ± 0.67
Subthalamus11.42 ± 0.41
Temporal Lobe10.57 ± 0.4
Thalamus10.57 ± 0.55
White Matter8.43 ± 0.73
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Oxr1CBCerebellum20.83
28.43
Oxr1CTXCerebral cortex98.52
100
Oxr1HIPHippocampal region42.49
81.83
Oxr1HPFHippocampal formation59.22
90.74
Oxr1HYHypothalamus19.25
20.62
Oxr1LSXLateral septal complex19.25
18.64
Oxr1MBMidbrain28.29
31.16
Oxr1MYMedulla27.31
41.71
Oxr1OLFOlfactory bulb72.43
81.98
Oxr1PPons28.58
41.52
Oxr1PALPallidum32.23
39.89
Oxr1RHPRetrohippocampal region83.73
100
Oxr1sAMYStriatum-like amygdalar nuclei25.54
25.87
Oxr1STRStriatum16.36
16.78
Oxr1STRdStriatum dorsal region14.87
15.31
Oxr1STRvStriatum ventral region15.11
15.39
Oxr1THThalamus84.38
92.37
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00501575 21 438 458 GNSDQDSFLHENSLHQEESQK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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