AutismKB 2.0

Annotation Detail for TAPBPL


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Basic Information Top
Gene Symbol:TAPBPL ( FLJ10143,TAPBP-R,TAPBPR )
Gene Full Name: TAP binding protein-like
Band: 12p13.31
Quick LinksEntrez ID:55080; OMIM: 607081; Uniprot ID:TPSNR_HUMAN; ENSEMBL ID: ENSG00000139192; HGNC ID: 30683
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst1 / 6231916
fetus9 / 56401215
neonate1 / 3109732
infant0 / 236200 
juvenile3 / 5555653
adult117 / 193912160
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma0 / 174750 
breast (mammary gland) tumor3 / 9417831
cervical tumor5 / 34366145
chondrosarcoma2 / 8282324
colorectal tumor8 / 11424670
esophageal tumor0 / 172900 
gastrointestinal tumor7 / 11936958
germ cell tumor4 / 26384515
glioma2 / 10688318
head and neck tumor5 / 13630236
kidney tumor0 / 689590 
leukemia1 / 9584210
liver tumor3 / 9635931
lung tumor3 / 10312729
lymphoma1 / 7175513
non-neoplasia15 / 97250154
normal172 / 336030751
ovarian tumor6 / 7668278
pancreatic tumor3 / 10461628
primitive neuroectodermal tumor of the CNS1 / 1256807
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor4 / 12494932
soft tissue/muscle tissue tumor2 / 12519115
uterine tumor3 / 9025733
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland5 / 33197150
ascites0 / 400150 
bladder0 / 297570 
blood9 / 12347872
bone1 / 7165513
bone marrow3 / 4880161
brain27 / 110098924
cervix7 / 48171145
connective tissue13 / 14925587
ear0 / 162120 
embryonic tissue3 / 21572213
esophagus0 / 202090 
eye3 / 21105414
heart5 / 8962655
intestine24 / 234472102
kidney8 / 21177737
larynx2 / 2414582
liver5 / 20774324
lung16 / 33697447
lymph0 / 442700 
lymph node1 / 9161010
mammary gland9 / 15327158
mouth1 / 6705214
muscle1 / 1077159
nerve2 / 15768126
ovary7 / 10205168
pancreas7 / 21481232
parathyroid0 / 205390 
pharynx1 / 4132824
pituitary gland3 / 16585180
placenta30 / 280825106
prostate9 / 18934547
salivary gland0 / 201550 
skin4 / 21057418
spleen9 / 53952166
stomach8 / 9661982
testis9 / 33044227
thymus9 / 81131110
thyroid6 / 47473126
tonsil0 / 169990 
trachea1 / 5241319
umbilical cord0 / 136800 
uterus13 / 23287855
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 218746_at
Cell line Expression level Expression bar
721_B_lymphoblasts20.1
Adipocyte5.95
AdrenalCortex6.75
Adrenalgland5.2
Amygdala6.25
Appendix6.4
AtrioventricularNode5.85
BDCA4+_DentriticCells121.8
Bonemarrow7
BronchialEpithelialCells5.95
CD105+_Endothelial6.2
CD14+_Monocytes59.3
CD19+_BCells(neg._sel.)36.4
CD33+_Myeloid19.5
CD34+8.6
CD4+_Tcells27.75
CD56+_NKCells152.7
CD71+_EarlyErythroid5.85
CD8+_Tcells23.8
CardiacMyocytes8.25
Caudatenucleus5.45
Cerebellum4.95
CerebellumPeduncles7.15
CiliaryGanglion4.75
CingulateCortex6.35
Colorectaladenocarcinoma6.55
DorsalRootGanglion5
FetalThyroid8.8
Fetalbrain5.85
Fetalliver5.4
Fetallung5.6
GlobusPallidus4.6
Heart28
Hypothalamus6.8
Kidney5.65
Leukemia_chronicMyelogenousK-5625.4
Leukemia_promyelocytic-HL-605.5
Leukemialymphoblastic(MOLT-4)5.25
Liver34.05
Lung17.5
Lymphnode17.5
Lymphoma_burkitts(Daudi)7.95
Lymphoma_burkitts(Raji)12.3
MedullaOblongata5.45
OccipitalLobe5.5
OlfactoryBulb5.1
Ovary4.2
Pancreas4.9
PancreaticIslet6.85
ParietalLobe6.6
Pituitary7.5
Placenta12.2
Pons5.85
PrefrontalCortex7.7
Prostate13.45
Salivarygland5.05
SkeletalMuscle7.3
Skin5.3
SmoothMuscle6.95
Spinalcord6.55
SubthalamicNucleus5.75
SuperiorCervicalGanglion7.85
TemporalLobe5.6
Testis5.3
TestisGermCell5.05
TestisIntersitial5.05
TestisLeydigCell6.05
TestisSeminiferousTubule5.25
Thalamus6.3
Thymus33.75
Thyroid58.85
Tongue6.2
Tonsil12.65
Trachea11.05
TrigeminalGanglion6.55
Uterus6.5
UterusCorpus5.55
WholeBlood40.15
Wholebrain5.05
colon36.35
pineal_day7.5
pineal_night7.54
retina7.675
small_intestine70.3
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_12777_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2.26 ± 1.05
Basal Forebrain1.92 ± 0.51
Basal Part of Pons1.72 ± 0.5
Cerebellar Cortex1.64 ± 0.79
Cerebellar Nuclei2.07 ± 0.6
Claustrum2.8 ± 0.94
Epithalamus1.54 ± 0.72
Frontal Lobe1.73 ± 0.78
Globus Pallidus2.78 ± 0.67
Hypothalamus1.82 ± 0.86
Insula1.6 ± 0.5
Limbic Lobe1.92 ± 0.76
Mesencephalon2.05 ± 0.82
Myelencephalon1.88 ± 0.68
Occipital Lobe2.03 ± 0.78
Parietal Lobe2 ± 0.87
Pontine Tegmentum1.97 ± 0.93
Striatum2.22 ± 0.83
Subthalamus1.87 ± 0.74
Temporal Lobe1.74 ± 0.79
Thalamus1.89 ± 0.77
White Matter1.95 ± 0.31
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
TapbplCBCerebellum0.04
0.18
TapbplCTXCerebral cortex1.99
1.76
TapbplHIPHippocampal region1.34
1.33
TapbplHPFHippocampal formation1.02
1
TapbplHYHypothalamus2.64
2.68
TapbplLSXLateral septal complex0.36
0.21
TapbplMBMidbrain0.47
0.79
TapbplMYMedulla0.14
0.25
TapbplOLFOlfactory bulb1.83
1.62
TapbplPPons0.88
1.83
TapbplPALPallidum1.6
1.27
TapbplRHPRetrohippocampal region0.03
0
TapbplsAMYStriatum-like amygdalar nuclei3.85
2.91
TapbplSTRStriatum1.32
0.98
TapbplSTRdStriatum dorsal region0.55
0.45
TapbplSTRvStriatum ventral region2.44
1.58
TapbplTHThalamus2.66
2.21
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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