AutismKB 2.0

Annotation Detail for ARGLU1


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Basic Information Top
Gene Symbol:ARGLU1 ( DKFZp686O08106,FLJ10154 )
Gene Full Name: arginine and glutamate rich 1
Band: 13q33.3
Quick LinksEntrez ID:55082; OMIM: NA; Uniprot ID:ARGL1_HUMAN; ENSEMBL ID: ENSG00000134884; HGNC ID: 25482
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body20 / 70761282
blastocyst22 / 62319353
fetus82 / 564012145
neonate0 / 310970 
infant0 / 236200 
juvenile2 / 5555635
adult210 / 1939121108
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma0 / 174750 
breast (mammary gland) tumor5 / 9417853
cervical tumor1 / 3436629
chondrosarcoma15 / 82823181
colorectal tumor8 / 11424670
esophageal tumor2 / 17290115
gastrointestinal tumor10 / 11936983
germ cell tumor7 / 26384526
glioma4 / 10688337
head and neck tumor7 / 13630251
kidney tumor3 / 6895943
leukemia19 / 95842198
liver tumor12 / 96359124
lung tumor0 / 1031270 
lymphoma7 / 7175597
non-neoplasia7 / 9725071
normal367 / 3360307109
ovarian tumor3 / 7668239
pancreatic tumor17 / 104616162
primitive neuroectodermal tumor of the CNS2 / 12568015
prostate cancer6 / 10268058
retinoblastoma3 / 4635664
skin tumor3 / 12494924
soft tissue/muscle tissue tumor3 / 12519123
uterine tumor25 / 90257276
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue6 / 13106457
adrenal gland5 / 33197150
ascites0 / 400150 
bladder0 / 297570 
blood14 / 123478113
bone12 / 71655167
bone marrow7 / 48801143
brain80 / 110098972
cervix1 / 4817120
connective tissue12 / 14925580
ear4 / 16212246
embryonic tissue64 / 215722296
esophagus2 / 2020998
eye27 / 211054127
heart12 / 89626133
intestine28 / 234472119
kidney12 / 21177756
larynx0 / 241450 
liver20 / 20774396
lung47 / 336974139
lymph1 / 4427022
lymph node17 / 91610185
mammary gland9 / 15327158
mouth2 / 6705229
muscle5 / 10771546
nerve5 / 15768317
ovary3 / 10205129
pancreas31 / 214812144
parathyroid9 / 20539438
pharynx3 / 4132872
pituitary gland7 / 16585422
placenta19 / 28082567
prostate11 / 18934558
salivary gland0 / 201550 
skin5 / 21057423
spleen2 / 5395237
stomach14 / 96619144
testis37 / 330442111
thymus21 / 81131258
thyroid6 / 47473126
tonsil0 / 169990 
trachea2 / 5241338
umbilical cord0 / 136800 
uterus54 / 232878231
vascular3 / 5178057
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 218067_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts695.45
Adipocyte84.5
AdrenalCortex147.35
Adrenalgland55.05
Amygdala610.4
Appendix182
AtrioventricularNode74
BDCA4+_DentriticCells685.25
Bonemarrow80.35
BronchialEpithelialCells173.4
CD105+_Endothelial413.2
CD14+_Monocytes231.55
CD19+_BCells(neg._sel.)662.7
CD33+_Myeloid587.6
CD34+904.25
CD4+_Tcells1645.3
CD56+_NKCells725.5
CD71+_EarlyErythroid253.8
CD8+_Tcells1545.2
CardiacMyocytes58.75
Caudatenucleus258.8
Cerebellum207.75
CerebellumPeduncles153.35
CiliaryGanglion52.3
CingulateCortex189.7
Colorectaladenocarcinoma260.8
DorsalRootGanglion65.05
FetalThyroid389.6
Fetalbrain991.65
Fetalliver135.1
Fetallung670.35
GlobusPallidus137.2
Heart19.2
Hypothalamus438.75
Kidney24.2
Leukemia_chronicMyelogenousK-562189.75
Leukemia_promyelocytic-HL-60561.65
Leukemialymphoblastic(MOLT-4)412
Liver21.8
Lung63
Lymphnode1080.15
Lymphoma_burkitts(Daudi)559.35
Lymphoma_burkitts(Raji)527.5
MedullaOblongata221.05
OccipitalLobe321.75
OlfactoryBulb302.6
Ovary104.05
Pancreas421.7
PancreaticIslet209.8
ParietalLobe187
Pituitary484.2
Placenta174.4
Pons98.7
PrefrontalCortex410.55
Prostate207.8
Salivarygland358.85
SkeletalMuscle30.3
Skin94.75
SmoothMuscle95.2
Spinalcord380.85
SubthalamicNucleus158.4
SuperiorCervicalGanglion64.05
TemporalLobe79
Testis124.05
TestisGermCell340.5
TestisIntersitial133.7
TestisLeydigCell154.45
TestisSeminiferousTubule205.8
Thalamus206.6
Thymus289.95
Thyroid512.5
Tongue152.4
Tonsil361.25
Trachea204.05
TrigeminalGanglion43.85
Uterus630.4
UterusCorpus97.5
WholeBlood194.95
Wholebrain129.9
colon358.25
pineal_day624.94
pineal_night580.38
retina520.05
small_intestine412.6
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_5454_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala9.12 ± 0.44
Basal Forebrain8.69 ± 0.21
Basal Part of Pons8.06 ± 0.26
Cerebellar Cortex8.34 ± 0.39
Cerebellar Nuclei8.21 ± 0.4
Claustrum9.04 ± 0.56
Epithalamus8.41 ± 0.32
Frontal Lobe8.36 ± 0.41
Globus Pallidus8.77 ± 0.19
Hypothalamus8.22 ± 0.34
Insula8.39 ± 0.47
Limbic Lobe8.92 ± 0.62
Mesencephalon8.56 ± 0.37
Myelencephalon8.59 ± 0.53
Occipital Lobe9.03 ± 0.52
Parietal Lobe8.56 ± 0.45
Pontine Tegmentum8.62 ± 0.39
Striatum9.28 ± 0.4
Subthalamus8.16 ± 0.14
Temporal Lobe8.55 ± 0.4
Thalamus8.47 ± 0.3
White Matter9.22 ± 0.54
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
9430010O03RikCBCerebellum33.12
43.53
9430010O03RikCTXCerebral cortex75.94
54.48
9430010O03RikHIPHippocampal region60.5
95.92
9430010O03RikHPFHippocampal formation63.84
77.68
9430010O03RikHYHypothalamus16.31
11.2
9430010O03RikLSXLateral septal complex49.48
33.69
9430010O03RikMBMidbrain20.82
15.75
9430010O03RikMYMedulla33.57
27.73
9430010O03RikOLFOlfactory bulb68.03
57.12
9430010O03RikPPons19.01
14.12
9430010O03RikPALPallidum22.18
16.39
9430010O03RikRHPRetrohippocampal region71.06
55.54
9430010O03RiksAMYStriatum-like amygdalar nuclei46.93
32.72
9430010O03RikSTRStriatum59.63
43.41
9430010O03RikSTRdStriatum dorsal region56.58
40.75
9430010O03RikSTRvStriatum ventral region83.53
61.95
9430010O03RikTHThalamus30.89
22.46
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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