Annotation Detail for AKIRIN2
Basic Information Top
| Gene Symbol: | AKIRIN2 ( C6orf166,FBI1,FLJ10342,dJ486L4.2 ) |
|---|---|
| Gene Full Name: | akirin 2 |
| Band: | 6q15 |
| Quick Links | Entrez ID:55122; OMIM: NA; Uniprot ID:AKIR2_HUMAN; ENSEMBL ID: ENSG00000135334; HGNC ID: 21407 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.485915
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 10 / 70761 | 141 |  |
| blastocyst | 1 / 62319 | 16 |  |
| fetus | 39 / 564012 | 69 | |
| neonate | 0 / 31097 | 0 | |
| infant | 12 / 23620 | 508 |  |
| juvenile | 2 / 55556 | 35 | |
| adult | 113 / 1939121 | 58 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 6 / 94178 | 63 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 9 / 82823 | 108 | |
| colorectal tumor | 5 / 114246 | 43 | |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 1 / 119369 | 8 |  |
| germ cell tumor | 18 / 263845 | 68 | |
| glioma | 10 / 106883 | 93 | |
| head and neck tumor | 1 / 136302 | 7 | |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 9 / 95842 | 93 | |
| liver tumor | 3 / 96359 | 31 | |
| lung tumor | 11 / 103127 | 106 | |
| lymphoma | 4 / 71755 | 55 | |
| non-neoplasia | 1 / 97250 | 10 | |
| normal | 220 / 3360307 | 65 | |
| ovarian tumor | 11 / 76682 | 143 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 15 / 125680 | 119 | |
| prostate cancer | 2 / 102680 | 19 | |
| retinoblastoma | 1 / 46356 | 21 | |
| skin tumor | 4 / 124949 | 32 | |
| soft tissue/muscle tissue tumor | 9 / 125191 | 71 | |
| uterine tumor | 5 / 90257 | 55 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 2 / 13106 | 152 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 0 / 29757 | 0 | |
| blood | 5 / 123478 | 40 | |
| bone | 4 / 71655 | 55 | |
| bone marrow | 2 / 48801 | 40 | |
| brain | 69 / 1100989 | 62 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 8 / 149255 | 53 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 13 / 215722 | 60 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 14 / 211054 | 66 | |
| heart | 4 / 89626 | 44 | |
| intestine | 23 / 234472 | 98 | |
| kidney | 13 / 211777 | 61 | |
| larynx | 0 / 24145 | 0 | |
| liver | 5 / 207743 | 24 | |
| lung | 34 / 336974 | 100 | |
| lymph | 2 / 44270 | 45 | |
| lymph node | 19 / 91610 | 207 | |
| mammary gland | 7 / 153271 | 45 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 8 / 107715 | 74 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 12 / 102051 | 117 | |
| pancreas | 7 / 214812 | 32 | |
| parathyroid | 2 / 20539 | 97 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 23 / 280825 | 81 | |
| prostate | 5 / 189345 | 26 | |
| salivary gland | 1 / 20155 | 49 | |
| skin | 13 / 210574 | 61 | |
| spleen | 3 / 53952 | 55 | |
| stomach | 2 / 96619 | 20 | |
| testis | 26 / 330442 | 78 | |
| thymus | 20 / 81131 | 246 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 3 / 16999 | 176 | |
| trachea | 4 / 52413 | 76 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 15 / 232878 | 64 | |
| vascular | 1 / 51780 | 19 | |
- Probe name: A_23_P428827
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 9.21 ± 0.4 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 8.78 ± 0.08 | |
| Basal Part of Pons | 9 ± 0.22 | |
| Cerebellar Cortex | 8.56 ± 0.17 | |
| Cerebellar Nuclei | 8.64 ± 0.29 | |
| Claustrum | 9.02 ± 0.44 | |
| Epithalamus | 8.56 ± 0.26 | |
| Frontal Lobe | 8.75 ± 0.29 | |
| Globus Pallidus | 8.67 ± 0.12 | |
| Hypothalamus | 8.65 ± 0.36 | |
| Insula | 8.86 ± 0.37 | |
| Limbic Lobe | 9.15 ± 0.35 | |
| Mesencephalon | 8.79 ± 0.28 | |
| Myelencephalon | 8.84 ± 0.27 | |
| Occipital Lobe | 9.06 ± 0.32 | |
| Parietal Lobe | 8.78 ± 0.35 | |
| Pontine Tegmentum | 8.74 ± 0.21 | |
| Striatum | 9.36 ± 0.25 | |
| Subthalamus | 8.46 ± 0.16 | |
| Temporal Lobe | 8.84 ± 0.29 | |
| Thalamus | 8.76 ± 0.25 | |
| White Matter | 8.53 ± 0.48 | |
Mouse Brain ISH 