AutismKB 2.0

Annotation Detail for CENPQ


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Basic Information Top
Gene Symbol:CENPQ ( C6orf139,CENP-Q,FLJ10545 )
Gene Full Name: centromere protein Q
Band: 6p12.3
Quick LinksEntrez ID:55166; OMIM: 611506; Uniprot ID:CENPQ_HUMAN; ENSEMBL ID: ENSG00000031691; HGNC ID: 21347
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body2 / 7076128
blastocyst0 / 623190 
fetus3 / 5640125
neonate0 / 310970 
infant0 / 236200 
juvenile1 / 5555617
adult22 / 193912111
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor1 / 9417810
cervical tumor0 / 343660 
chondrosarcoma1 / 8282312
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor3 / 11936925
germ cell tumor4 / 26384515
glioma6 / 10688356
head and neck tumor0 / 1363020 
kidney tumor2 / 6895929
leukemia1 / 9584210
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma2 / 7175527
non-neoplasia1 / 9725010
normal33 / 33603079
ovarian tumor2 / 7668226
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma1 / 4635621
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor2 / 12519115
uterine tumor3 / 9025733
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood1 / 1234788
bone1 / 7165513
bone marrow0 / 488010 
brain14 / 110098912
cervix0 / 481710 
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue2 / 2157229
esophagus0 / 202090 
eye3 / 21105414
heart0 / 896260 
intestine1 / 2344724
kidney2 / 2117779
larynx0 / 241450 
liver2 / 2077439
lung2 / 3369745
lymph2 / 4427045
lymph node4 / 9161043
mammary gland2 / 15327113
mouth0 / 670520 
muscle0 / 1077150 
nerve0 / 157680 
ovary2 / 10205119
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland2 / 16585120
placenta2 / 2808257
prostate0 / 1893450 
salivary gland0 / 201550 
skin0 / 2105740 
spleen0 / 539520 
stomach5 / 9661951
testis5 / 33044215
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus5 / 23287821
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 219294_at
Cell line Expression level Expression bar
721_B_lymphoblasts7.35
Adipocyte5.7
AdrenalCortex7.05
Adrenalgland5.25
Amygdala5.9
Appendix10
AtrioventricularNode6.05
BDCA4+_DentriticCells5.95
Bonemarrow6.4
BronchialEpithelialCells5.55
CD105+_Endothelial6
CD14+_Monocytes6.35
CD19+_BCells(neg._sel.)7.05
CD33+_Myeloid7.2
CD34+7.25
CD4+_Tcells6
CD56+_NKCells7.15
CD71+_EarlyErythroid5.9
CD8+_Tcells5.4
CardiacMyocytes9.2
Caudatenucleus5.2
Cerebellum4.8
CerebellumPeduncles7
CiliaryGanglion4.75
CingulateCortex6.15
Colorectaladenocarcinoma5.85
DorsalRootGanglion4.95
FetalThyroid5.8
Fetalbrain5.6
Fetalliver5.25
Fetallung4.6
GlobusPallidus4.55
Heart8.4
Hypothalamus6
Kidney5.2
Leukemia_chronicMyelogenousK-5625.3
Leukemia_promyelocytic-HL-605.15
Leukemialymphoblastic(MOLT-4)8.5
Liver8.25
Lung6.3
Lymphnode4.85
Lymphoma_burkitts(Daudi)7.85
Lymphoma_burkitts(Raji)8.9
MedullaOblongata5.4
OccipitalLobe5.2
OlfactoryBulb4.5
Ovary5.3
Pancreas4.9
PancreaticIslet6.25
ParietalLobe6.55
Pituitary6.85
Placenta5.75
Pons5.85
PrefrontalCortex6.95
Prostate6.6
Salivarygland4.95
SkeletalMuscle7.75
Skin5.1
SmoothMuscle6.5
Spinalcord6.15
SubthalamicNucleus5.5
SuperiorCervicalGanglion12.45
TemporalLobe6.35
Testis5
TestisGermCell4.65
TestisIntersitial4.95
TestisLeydigCell6.2
TestisSeminiferousTubule4.9
Thalamus6.05
Thymus4.4
Thyroid7.1
Tongue6.35
Tonsil5.8
Trachea4.8
TrigeminalGanglion11.7
Uterus4.7
UterusCorpus5.75
WholeBlood6.35
Wholebrain4.7
colon5.85
pineal_day7.24
pineal_night7.08
retina7.05
small_intestine5.55
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_4959_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala3.86 ± 0.69
Basal Forebrain4.09 ± 0.45
Basal Part of Pons3.48 ± 0.47
Cerebellar Cortex3.77 ± 0.45
Cerebellar Nuclei4.25 ± 0.72
Claustrum3.97 ± 0.73
Epithalamus4.3 ± 0.34
Frontal Lobe3.68 ± 0.65
Globus Pallidus4.88 ± 0.28
Hypothalamus3.62 ± 0.63
Insula3.53 ± 0.52
Limbic Lobe3.71 ± 0.68
Mesencephalon4.07 ± 0.61
Myelencephalon3.82 ± 0.61
Occipital Lobe3.96 ± 0.52
Parietal Lobe3.8 ± 0.68
Pontine Tegmentum3.86 ± 0.66
Striatum4.09 ± 0.52
Subthalamus4.38 ± 0.46
Temporal Lobe3.69 ± 0.62
Thalamus3.81 ± 0.51
White Matter5.71 ± 0.35
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
CenpqCBCerebellum1.62
2.08
CenpqCTXCerebral cortex1.11
1.05
CenpqHIPHippocampal region1.29
1.34
CenpqHPFHippocampal formation1.46
1.44
CenpqHYHypothalamus1.01
1.29
CenpqLSXLateral septal complex0.07
0.04
CenpqMBMidbrain0.74
1.35
CenpqMYMedulla4.82
5.53
CenpqOLFOlfactory bulb2.18
1.99
CenpqPPons5.38
7.06
CenpqPALPallidum0.7
0.53
CenpqRHPRetrohippocampal region1.74
1.63
CenpqsAMYStriatum-like amygdalar nuclei0.25
0.37
CenpqSTRStriatum0.45
0.42
CenpqSTRdStriatum dorsal region0.44
0.43
CenpqSTRvStriatum ventral region0.71
0.6
CenpqTHThalamus0.53
0.53
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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