AutismKB 2.0

Annotation Detail for NUDT11


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Basic Information Top
Gene Symbol:NUDT11 ( APS1,ASP1,DIPP3b,DIPP3beta,FLJ10628,hDIPP3beta )
Gene Full Name: nudix (nucleoside diphosphate linked moiety X)-type motif 11
Band: Xp11.22
Quick LinksEntrez ID:55190; OMIM: 300528; Uniprot ID:NUD11_HUMAN; ENSEMBL ID: ENSG00000196368; HGNC ID: 18011
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body2 / 7076128
blastocyst2 / 6231932
fetus18 / 56401231
neonate0 / 310970 
infant0 / 236200 
juvenile5 / 5555689
adult27 / 193912113
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma2 / 8282324
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor8 / 26384530
glioma2 / 10688318
head and neck tumor0 / 1363020 
kidney tumor1 / 6895914
leukemia1 / 9584210
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal80 / 336030723
ovarian tumor0 / 766820 
pancreatic tumor1 / 1046169
primitive neuroectodermal tumor of the CNS8 / 12568063
prostate cancer1 / 1026809
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor1 / 1251917
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood1 / 1234788
bone1 / 7165513
bone marrow0 / 488010 
brain41 / 110098937
cervix0 / 481710 
connective tissue1 / 1492556
ear0 / 162120 
embryonic tissue4 / 21572218
esophagus0 / 202090 
eye2 / 2110549
heart0 / 896260 
intestine0 / 2344720 
kidney1 / 2117774
larynx0 / 241450 
liver0 / 2077430 
lung1 / 3369742
lymph0 / 442700 
lymph node0 / 916100 
mammary gland0 / 1532710 
mouth0 / 670520 
muscle0 / 1077150 
nerve0 / 157680 
ovary2 / 10205119
pancreas9 / 21481241
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta0 / 2808250 
prostate2 / 18934510
salivary gland0 / 201550 
skin0 / 2105740 
spleen0 / 539520 
stomach0 / 966190 
testis17 / 33044251
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus1 / 2328784
vascular4 / 5178077
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 219855_at
Cell line Expression level Expression bar
721_B_lymphoblasts7.55
Adipocyte10.95
AdrenalCortex17.5
Adrenalgland10.7
Amygdala29.65
Appendix24.2
AtrioventricularNode16.95
BDCA4+_DentriticCells8.55
Bonemarrow11.6
BronchialEpithelialCells13.7
CD105+_Endothelial10.3
CD14+_Monocytes8.85
CD19+_BCells(neg._sel.)9.85
CD33+_Myeloid10.9
CD34+16.1
CD4+_Tcells7.85
CD56+_NKCells10.95
CD71+_EarlyErythroid8.1
CD8+_Tcells6.75
CardiacMyocytes21.85
Caudatenucleus17.25
Cerebellum11.2
CerebellumPeduncles13.25
CiliaryGanglion13.15
CingulateCortex16.5
Colorectaladenocarcinoma8.95
DorsalRootGanglion14.1
FetalThyroid9.45
Fetalbrain204.45
Fetalliver9.25
Fetallung7.75
GlobusPallidus16.4
Heart12.25
Hypothalamus40.45
Kidney8.75
Leukemia_chronicMyelogenousK-5628.2
Leukemia_promyelocytic-HL-609.05
Leukemialymphoblastic(MOLT-4)27.95
Liver12.3
Lung9.85
Lymphnode8.35
Lymphoma_burkitts(Daudi)12.05
Lymphoma_burkitts(Raji)16.45
MedullaOblongata26.85
OccipitalLobe15
OlfactoryBulb7.8
Ovary13.95
Pancreas9
PancreaticIslet10.9
ParietalLobe14.25
Pituitary12.65
Placenta8.8
Pons18.3
PrefrontalCortex43.65
Prostate14.7
Salivarygland10.7
SkeletalMuscle28.4
Skin18.25
SmoothMuscle12
Spinalcord11.05
SubthalamicNucleus20.3
SuperiorCervicalGanglion38.6
TemporalLobe22.1
Testis93.45
TestisGermCell137
TestisIntersitial30.1
TestisLeydigCell25.55
TestisSeminiferousTubule74.35
Thalamus9.95
Thymus7.55
Thyroid10.2
Tongue12
Tonsil11.15
Trachea8.3
TrigeminalGanglion21.05
Uterus9.15
UterusCorpus24.65
WholeBlood9.7
Wholebrain36.5
colon9.95
pineal_day10.86
pineal_night10.3
retina11.5
small_intestine9
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_24_P345002
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala4.81 ± 0.54
Basal Forebrain4.63 ± 0.79
Basal Part of Pons4.13 ± 0.66
Cerebellar Cortex3.91 ± 0.66
Cerebellar Nuclei3.64 ± 0.52
Claustrum4.78 ± 0.83
Epithalamus3.96 ± 0.69
Frontal Lobe4.46 ± 0.53
Globus Pallidus2.95 ± 0.65
Hypothalamus5.47 ± 0.84
Insula4.78 ± 0.31
Limbic Lobe4.3 ± 0.76
Mesencephalon4.41 ± 0.78
Myelencephalon4.25 ± 0.76
Occipital Lobe3.49 ± 0.98
Parietal Lobe4.21 ± 0.67
Pontine Tegmentum4.19 ± 0.85
Striatum3.87 ± 1.04
Subthalamus4.37 ± 0.37
Temporal Lobe4.63 ± 0.54
Thalamus3.82 ± 0.65
White Matter2.37 ± 0.88
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Nudt11CBCerebellum31.43
57.45
Nudt11CTXCerebral cortex100
100
Nudt11HIPHippocampal region60.96
100
Nudt11HPFHippocampal formation71.16
97.49
Nudt11HYHypothalamus80.95
77.61
Nudt11LSXLateral septal complex37.72
30.9
Nudt11MBMidbrain60.92
64.11
Nudt11MYMedulla72.83
97.72
Nudt11OLFOlfactory bulb72.58
74.96
Nudt11PPons60.74
76.44
Nudt11PALPallidum71.49
75.32
Nudt11RHPRetrohippocampal region88.84
87.44
Nudt11sAMYStriatum-like amygdalar nuclei74.89
66.3
Nudt11STRStriatum60.15
49.79
Nudt11STRdStriatum dorsal region56.24
46.06
Nudt11STRvStriatum ventral region77.64
62.3
Nudt11THThalamus76.61
77.92
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00008439 15 128 142 VLQCHKPVHAEYLEK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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