AutismKB 2.0

Annotation Detail for FGGY


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Basic Information Top
Gene Symbol:FGGY ( FLJ10986 )
Gene Full Name: FGGY carbohydrate kinase domain containing
Band: 1p32.1
Quick LinksEntrez ID:55277; OMIM: 611370; Uniprot ID:FGGY_HUMAN; ENSEMBL ID: ENSG00000172456; HGNC ID: 25610
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body3 / 7076142
blastocyst1 / 6231916
fetus11 / 56401219
neonate0 / 310970 
infant0 / 236200 
juvenile3 / 5555653
adult89 / 193912145
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma1 / 1747557
breast (mammary gland) tumor1 / 9417810
cervical tumor1 / 3436629
chondrosarcoma4 / 8282348
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor7 / 11936958
germ cell tumor4 / 26384515
glioma2 / 10688318
head and neck tumor0 / 1363020 
kidney tumor1 / 6895914
leukemia1 / 9584210
liver tumor5 / 9635951
lung tumor2 / 10312719
lymphoma1 / 7175513
non-neoplasia3 / 9725030
normal84 / 336030724
ovarian tumor0 / 766820 
pancreatic tumor1 / 1046169
primitive neuroectodermal tumor of the CNS3 / 12568023
prostate cancer0 / 1026800 
retinoblastoma1 / 4635621
skin tumor5 / 12494940
soft tissue/muscle tissue tumor47 / 125191375
uterine tumor2 / 9025722
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland0 / 331970 
ascites1 / 4001524
bladder2 / 2975767
blood1 / 1234788
bone3 / 7165541
bone marrow1 / 4880120
brain24 / 110098921
cervix1 / 4817120
connective tissue51 / 149255341
ear0 / 162120 
embryonic tissue4 / 21572218
esophagus0 / 202090 
eye5 / 21105423
heart3 / 8962633
intestine3 / 23447212
kidney3 / 21177714
larynx0 / 241450 
liver10 / 20774348
lung7 / 33697420
lymph0 / 442700 
lymph node4 / 9161043
mammary gland5 / 15327132
mouth0 / 670520 
muscle3 / 10771527
nerve2 / 15768126
ovary2 / 10205119
pancreas4 / 21481218
parathyroid0 / 205390 
pharynx1 / 4132824
pituitary gland0 / 165850 
placenta12 / 28082542
prostate0 / 1893450 
salivary gland0 / 201550 
skin5 / 21057423
spleen0 / 539520 
stomach7 / 9661972
testis2 / 3304426
thymus2 / 8113124
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus2 / 2328788
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 219718_at
Cell line Expression level Expression bar
721_B_lymphoblasts10.45
Adipocyte4.15
AdrenalCortex4.55
Adrenalgland3.55
Amygdala4.45
Appendix4.35
AtrioventricularNode3.4
BDCA4+_DentriticCells4.6
Bonemarrow4.15
BronchialEpithelialCells4.15
CD105+_Endothelial4.3
CD14+_Monocytes4.5
CD19+_BCells(neg._sel.)4.55
CD33+_Myeloid5.45
CD34+5.5
CD4+_Tcells4.55
CD56+_NKCells5.05
CD71+_EarlyErythroid4
CD8+_Tcells4.15
CardiacMyocytes5.5
Caudatenucleus3.8
Cerebellum3.45
CerebellumPeduncles4.85
CiliaryGanglion3.05
CingulateCortex4.35
Colorectaladenocarcinoma4.25
DorsalRootGanglion3.35
FetalThyroid4.15
Fetalbrain4.2
Fetalliver3.65
Fetallung3.4
GlobusPallidus3.15
Heart5.4
Hypothalamus4.65
Kidney3.45
Leukemia_chronicMyelogenousK-5623.85
Leukemia_promyelocytic-HL-603.8
Leukemialymphoblastic(MOLT-4)3.45
Liver7.35
Lung4.65
Lymphnode3.7
Lymphoma_burkitts(Daudi)5.5
Lymphoma_burkitts(Raji)5.95
MedullaOblongata3.9
OccipitalLobe3.8
OlfactoryBulb3.35
Ovary2.8
Pancreas3.4
PancreaticIslet4.5
ParietalLobe4.45
Pituitary4.95
Placenta4.35
Pons4.1
PrefrontalCortex5.25
Prostate5
Salivarygland3.4
SkeletalMuscle9.75
Skin3.4
SmoothMuscle5.45
Spinalcord4.55
SubthalamicNucleus3.9
SuperiorCervicalGanglion4.95
TemporalLobe3.9
Testis3.65
TestisGermCell3.6
TestisIntersitial3.6
TestisLeydigCell4.2
TestisSeminiferousTubule3.65
Thalamus4.35
Thymus3.35
Thyroid5.35
Tongue4.25
Tonsil4.1
Trachea3.55
TrigeminalGanglion4.35
Uterus3.5
UterusCorpus3.8
WholeBlood4.65
Wholebrain3.6
colon4.25
pineal_day5.38
pineal_night5.38
retina5.15
small_intestine4.1
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P22169
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala5.76 ± 0.34
Basal Forebrain5.74 ± 0.59
Basal Part of Pons5.78 ± 0.34
Cerebellar Cortex5.84 ± 0.35
Cerebellar Nuclei5.07 ± 0.42
Claustrum5.11 ± 0.64
Epithalamus6.17 ± 0.39
Frontal Lobe5.66 ± 0.45
Globus Pallidus6.27 ± 0.37
Hypothalamus6.11 ± 0.29
Insula5.88 ± 0.33
Limbic Lobe5.38 ± 0.63
Mesencephalon5.78 ± 0.55
Myelencephalon5.52 ± 0.54
Occipital Lobe5.03 ± 0.46
Parietal Lobe5.48 ± 0.49
Pontine Tegmentum5.62 ± 0.52
Striatum5.91 ± 0.46
Subthalamus5.6 ± 0.48
Temporal Lobe5.56 ± 0.44
Thalamus5.83 ± 0.4
White Matter4.08 ± 0.24
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
2310009E04RikCBCerebellum4.08
5
2310009E04RikCTXCerebral cortex11.16
7.52
2310009E04RikHIPHippocampal region3.67
3.18
2310009E04RikHPFHippocampal formation3.34
2.71
2310009E04RikHYHypothalamus5.79
4.39
2310009E04RikLSXLateral septal complex1.05
0.67
2310009E04RikMBMidbrain5.17
5.08
2310009E04RikMYMedulla11.41
12.48
2310009E04RikOLFOlfactory bulb4.94
3.34
2310009E04RikPPons7.85
7.88
2310009E04RikPALPallidum4.55
3.7
2310009E04RikRHPRetrohippocampal region2.77
2
2310009E04RiksAMYStriatum-like amygdalar nuclei1.73
1.43
2310009E04RikSTRStriatum2.24
2.37
2310009E04RikSTRdStriatum dorsal region2.96
3.39
2310009E04RikSTRvStriatum ventral region0.64
0.51
2310009E04RikTHThalamus4.35
3.61
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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