AutismKB 2.0

Annotation Detail for MNS1


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Basic Information Top
Gene Symbol:MNS1 ( FLJ11222,FLJ26051 )
Gene Full Name: meiosis-specific nuclear structural 1
Band: 15q21.3
Quick LinksEntrez ID:55329; OMIM: 610766; Uniprot ID:MNS1_HUMAN; ENSEMBL ID: ENSG00000138587; HGNC ID: 29636
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body2 / 7076128
blastocyst0 / 623190 
fetus9 / 56401215
neonate0 / 310970 
infant1 / 2362042
juvenile0 / 555560 
adult18 / 19391219
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma1 / 1747557
breast (mammary gland) tumor1 / 9417810
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor3 / 26384511
glioma0 / 1068830 
head and neck tumor1 / 1363027
kidney tumor1 / 6895914
leukemia1 / 9584210
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal55 / 336030716
ovarian tumor0 / 766820 
pancreatic tumor5 / 10461647
primitive neuroectodermal tumor of the CNS3 / 12568023
prostate cancer3 / 10268029
retinoblastoma0 / 463560 
skin tumor4 / 12494932
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder1 / 2975733
blood0 / 1234780 
bone0 / 716550 
bone marrow1 / 4880120
brain12 / 110098910
cervix0 / 481710 
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue2 / 2157229
esophagus0 / 202090 
eye4 / 21105418
heart1 / 8962611
intestine1 / 2344724
kidney2 / 2117779
larynx0 / 241450 
liver0 / 2077430 
lung7 / 33697420
lymph0 / 442700 
lymph node0 / 916100 
mammary gland2 / 15327113
mouth0 / 670520 
muscle2 / 10771518
nerve0 / 157680 
ovary0 / 1020510 
pancreas5 / 21481223
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta7 / 28082524
prostate4 / 18934521
salivary gland0 / 201550 
skin4 / 21057418
spleen0 / 539520 
stomach0 / 966190 
testis22 / 33044266
thymus1 / 8113112
thyroid1 / 4747321
tonsil0 / 169990 
trachea1 / 5241319
umbilical cord0 / 136800 
uterus1 / 2328784
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 219703_at
Cell line Expression level Expression bar
721_B_lymphoblasts8.1
Adipocyte7.05
AdrenalCortex9.1
Adrenalgland6.6
Amygdala7.35
Appendix10.85
AtrioventricularNode7.9
BDCA4+_DentriticCells6.95
Bonemarrow8.35
BronchialEpithelialCells6.9
CD105+_Endothelial7.5
CD14+_Monocytes7.7
CD19+_BCells(neg._sel.)7.35
CD33+_Myeloid8.7
CD34+11.9
CD4+_Tcells7.35
CD56+_NKCells8.1
CD71+_EarlyErythroid7
CD8+_Tcells6.35
CardiacMyocytes13.5
Caudatenucleus6.6
Cerebellum6.05
CerebellumPeduncles8.85
CiliaryGanglion6.95
CingulateCortex7.75
Colorectaladenocarcinoma7.3
DorsalRootGanglion6.85
FetalThyroid7.45
Fetalbrain6.9
Fetalliver6.65
Fetallung5.9
GlobusPallidus5.8
Heart12.8
Hypothalamus8.05
Kidney6.9
Leukemia_chronicMyelogenousK-5626.5
Leukemia_promyelocytic-HL-606.4
Leukemialymphoblastic(MOLT-4)5.5
Liver11.45
Lung7.9
Lymphnode5.95
Lymphoma_burkitts(Daudi)19.85
Lymphoma_burkitts(Raji)10.8
MedullaOblongata6.4
OccipitalLobe6.45
OlfactoryBulb5.65
Ovary5.6
Pancreas6
PancreaticIslet7.8
ParietalLobe8.3
Pituitary8.85
Placenta7.2
Pons7.3
PrefrontalCortex8.9
Prostate8.25
Salivarygland6.2
SkeletalMuscle11.85
Skin7.45
SmoothMuscle8.15
Spinalcord7.75
SubthalamicNucleus7.2
SuperiorCervicalGanglion12.8
TemporalLobe6.85
Testis7.9
TestisGermCell97.6
TestisIntersitial154.65
TestisLeydigCell113.1
TestisSeminiferousTubule65.65
Thalamus7.75
Thymus5.4
Thyroid8.8
Tongue8.5
Tonsil7.3
Trachea6.1
TrigeminalGanglion8.75
Uterus5.8
UterusCorpus7.65
WholeBlood7.75
Wholebrain5.7
colon7.25
pineal_day8.96
pineal_night8.9
retina8.9
small_intestine6.9
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_7941_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala4.47 ± 0.63
Basal Forebrain4.28 ± 0.77
Basal Part of Pons5.06 ± 0.34
Cerebellar Cortex5.11 ± 0.42
Cerebellar Nuclei4.23 ± 0.45
Claustrum4.11 ± 0.79
Epithalamus6.58 ± 0.94
Frontal Lobe4.36 ± 0.64
Globus Pallidus4.36 ± 0.68
Hypothalamus4.13 ± 0.41
Insula4.14 ± 0.4
Limbic Lobe4.31 ± 0.64
Mesencephalon4.53 ± 0.62
Myelencephalon4.37 ± 0.74
Occipital Lobe4.77 ± 0.66
Parietal Lobe4.36 ± 0.61
Pontine Tegmentum4.12 ± 0.71
Striatum3.93 ± 0.92
Subthalamus4.8 ± 0.06
Temporal Lobe4.27 ± 0.65
Thalamus4.07 ± 0.53
White Matter4.83 ± 0.49
Mouse Brain ISH
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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