Annotation Detail for LSG1
Basic Information Top
| Gene Symbol: | LSG1 ( FLJ11301,FLJ27294 ) |
|---|---|
| Gene Full Name: | large subunit GTPase 1 homolog (S. cerevisiae) |
| Band: | 3q29 |
| Quick Links | Entrez ID:55341; OMIM: 610780; Uniprot ID:LSG1_HUMAN; ENSEMBL ID: ENSG00000041802; HGNC ID: 25652 |
| Relate to Another Database: | SFARIGene; denovo-db |
Unigene EST- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 221535_at
| Cell line | Expression level | Expression bar |
|---|---|---|
 | ||
| 721_B_lymphoblasts | 52.15 |  |
| Adipocyte | 29.2 |  |
| AdrenalCortex | 20.35 | |
| Adrenalgland | 16.95 | |
| Amygdala | 21.45 | |
| Appendix | 25.35 | |
| AtrioventricularNode | 18.95 | |
| BDCA4+_DentriticCells | 36.25 | |
| Bonemarrow | 24.9 | |
| BronchialEpithelialCells | 23.8 | |
| CD105+_Endothelial | 25.9 | |
| CD14+_Monocytes | 35.15 | |
| CD19+_BCells(neg._sel.) | 31.75 | |
| CD33+_Myeloid | 31.5 | |
| CD34+ | 113.55 | |
| CD4+_Tcells | 53.6 | |
| CD56+_NKCells | 33.2 | |
| CD71+_EarlyErythroid | 13.65 | |
| CD8+_Tcells | 64.65 | |
| CardiacMyocytes | 141.05 | |
| Caudatenucleus | 32.85 | |
| Cerebellum | 18.85 | |
| CerebellumPeduncles | 31.35 | |
| CiliaryGanglion | 18.1 | |
| CingulateCortex | 28.45 | |
| Colorectaladenocarcinoma | 38.6 | |
| DorsalRootGanglion | 19.8 | |
| FetalThyroid | 48.95 | |
| Fetalbrain | 31.45 | |
| Fetalliver | 19.75 | |
| Fetallung | 21.75 | |
| GlobusPallidus | 22.15 | |
| Heart | 26.8 | |
| Hypothalamus | 37.05 | |
| Kidney | 22.35 | |
| Leukemia_chronicMyelogenousK-562 | 32.6 | |
| Leukemia_promyelocytic-HL-60 | 21.1 | |
| Leukemialymphoblastic(MOLT-4) | 41.95 | |
| Liver | 24.2 | |
| Lung | 21.3 | |
| Lymphnode | 33.95 | |
| Lymphoma_burkitts(Daudi) | 89.75 | |
| Lymphoma_burkitts(Raji) | 28.25 | |
| MedullaOblongata | 30.1 | |
| OccipitalLobe | 11.9 | |
| OlfactoryBulb | 23.75 | |
| Ovary | 16.7 | |
| Pancreas | 19.25 | |
| PancreaticIslet | 46.8 | |
| ParietalLobe | 19.35 | |
| Pituitary | 34.45 | |
| Placenta | 25.05 | |
| Pons | 29.45 | |
| PrefrontalCortex | 27.85 | |
| Prostate | 20.6 | |
| Salivarygland | 19.8 | |
| SkeletalMuscle | 39 | |
| Skin | 24.25 | |
| SmoothMuscle | 34.45 | |
| Spinalcord | 28.55 | |
| SubthalamicNucleus | 24.15 | |
| SuperiorCervicalGanglion | 30.15 | |
| TemporalLobe | 20.7 | |
| Testis | 16.45 | |
| TestisGermCell | 19.15 | |
| TestisIntersitial | 14 | |
| TestisLeydigCell | 32.2 | |
| TestisSeminiferousTubule | 40.9 | |
| Thalamus | 34.7 | |
| Thymus | 38.45 | |
| Thyroid | 27.95 | |
| Tongue | 17.2 | |
| Tonsil | 24.4 | |
| Trachea | 28.35 | |
| TrigeminalGanglion | 31.4 | |
| Uterus | 15.05 | |
| UterusCorpus | 22 | |
| WholeBlood | 28.85 | |
| Wholebrain | 16.05 | |
| colon | 21.8 | |
| pineal_day | 40.58 | |
| pineal_night | 30.36 | |
| retina | 41.75 | |
| small_intestine | 23.1 | |
- Probe name: A_24_P148657
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 5.75 ± 0.46 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 6.08 ± 0.28 | |
| Basal Part of Pons | 6.39 ± 0.23 | |
| Cerebellar Cortex | 6.01 ± 0.31 | |
| Cerebellar Nuclei | 6.27 ± 0.28 | |
| Claustrum | 5.7 ± 0.71 | |
| Epithalamus | 6.19 ± 0.5 | |
| Frontal Lobe | 6.26 ± 0.33 | |
| Globus Pallidus | 6.2 ± 0.37 | |
| Hypothalamus | 6.44 ± 0.21 | |
| Insula | 6.2 ± 0.23 | |
| Limbic Lobe | 5.98 ± 0.43 | |
| Mesencephalon | 6.15 ± 0.33 | |
| Myelencephalon | 6.05 ± 0.44 | |
| Occipital Lobe | 5.73 ± 0.39 | |
| Parietal Lobe | 6.07 ± 0.36 | |
| Pontine Tegmentum | 5.99 ± 0.46 | |
| Striatum | 5.97 ± 0.33 | |
| Subthalamus | 6.06 ± 0.78 | |
| Temporal Lobe | 6.07 ± 0.33 | |
| Thalamus | 6.1 ± 0.31 | |
| White Matter | 6.86 ± 0.13 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Lsg1 | CB | Cerebellum | 3.78 | |
| 3.56 | | |||
| Lsg1 | CTX | Cerebral cortex | 2.86 | |
| 1.78 | | |||
| Lsg1 | HIP | Hippocampal region | 3.55 | |
| 3.24 | | |||
| Lsg1 | HPF | Hippocampal formation | 3.48 | |
| 2.83 | | |||
| Lsg1 | HY | Hypothalamus | 0.47 | |
| 0.35 | | |||
| Lsg1 | LSX | Lateral septal complex | 0.92 | |
| 0.56 | | |||
| Lsg1 | MB | Midbrain | 1.23 | |
| 1.2 | | |||
| Lsg1 | MY | Medulla | 4.03 | |
| 3.94 | | |||
| Lsg1 | OLF | Olfactory bulb | 4.89 | |
| 3.03 | | |||
| Lsg1 | P | Pons | 2.32 | |
| 2.39 | | |||
| Lsg1 | PAL | Pallidum | 1.38 | |
| 1.26 | | |||
| Lsg1 | RHP | Retrohippocampal region | 3.43 | |
| 2.3 | | |||
| Lsg1 | sAMY | Striatum-like amygdalar nuclei | 0.7 | |
| 0.46 | | |||
| Lsg1 | STR | Striatum | 1.55 | |
| 1.1 | | |||
| Lsg1 | STRd | Striatum dorsal region | 1.17 | |
| 0.79 | | |||
| Lsg1 | STRv | Striatum ventral region | 3.43 | |
| 2.45 | | |||
| Lsg1 | TH | Thalamus | 1.79 | |
| 1.37 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00004962 | 13 | 103 | 115 | LHEENKQFLCIPR | Peptide Atlas |