Annotation Detail for C17orf79
Basic Information Top
| Gene Symbol: | C17orf79 ( COPR5,FLJ21119,HSA272196,TTP1 ) |
|---|---|
| Gene Full Name: | chromosome 17 open reading frame 79 |
| Band: | 17q11.2 |
| Quick Links | Entrez ID:55352; OMIM: NA; Uniprot ID:COPR5_HUMAN; ENSEMBL ID: ENSG00000172301; HGNC ID: |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.462729
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 6 / 564012 | 10 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 102 / 1939121 | 52 |  |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 3 / 94178 | 31 |  |
| cervical tumor | 1 / 34366 | 29 | |
| chondrosarcoma | 6 / 82823 | 72 | |
| colorectal tumor | 1 / 114246 | 8 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 6 / 119369 | 50 | |
| germ cell tumor | 23 / 263845 | 87 | |
| glioma | 12 / 106883 | 112 | |
| head and neck tumor | 11 / 136302 | 80 | |
| kidney tumor | 3 / 68959 | 43 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 13 / 103127 | 126 | |
| lymphoma | 1 / 71755 | 13 | |
| non-neoplasia | 5 / 97250 | 51 | |
| normal | 123 / 3360307 | 36 | |
| ovarian tumor | 6 / 76682 | 78 | |
| pancreatic tumor | 16 / 104616 | 152 | |
| primitive neuroectodermal tumor of the CNS | 6 / 125680 | 47 | |
| prostate cancer | 12 / 102680 | 116 | |
| retinoblastoma | 2 / 46356 | 43 | |
| skin tumor | 6 / 124949 | 48 | |
| soft tissue/muscle tissue tumor | 19 / 125191 | 151 | |
| uterine tumor | 2 / 90257 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 2 / 40015 | 49 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 5 / 71655 | 69 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 53 / 1100989 | 48 | |
| cervix | 1 / 48171 | 20 | |
| connective tissue | 4 / 149255 | 26 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 0 / 215722 | 0 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 19 / 211054 | 90 | |
| heart | 1 / 89626 | 11 | |
| intestine | 2 / 234472 | 8 | |
| kidney | 29 / 211777 | 136 | |
| larynx | 0 / 24145 | 0 | |
| liver | 1 / 207743 | 4 | |
| lung | 22 / 336974 | 65 | |
| lymph | 1 / 44270 | 22 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 3 / 153271 | 19 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 2 / 107715 | 18 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 7 / 102051 | 68 | |
| pancreas | 28 / 214812 | 130 | |
| parathyroid | 1 / 20539 | 48 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 11 / 280825 | 39 | |
| prostate | 29 / 189345 | 153 | |
| salivary gland | 8 / 20155 | 396 |  |
| skin | 9 / 210574 | 42 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 5 / 96619 | 51 | |
| testis | 19 / 330442 | 57 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 4 / 47473 | 84 | |
| tonsil | 2 / 16999 | 117 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 28 / 232878 | 120 | |
| vascular | 1 / 51780 | 19 | |
- Probe name: A_24_P130296
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 9.52 ± 0.47 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 9.77 ± 0.29 | |
| Basal Part of Pons | 10.27 ± 0.49 | |
| Cerebellar Cortex | 10.02 ± 0.37 | |
| Cerebellar Nuclei | 9.99 ± 0.34 | |
| Claustrum | 9.37 ± 0.73 | |
| Epithalamus | 10.41 ± 0.26 | |
| Frontal Lobe | 10.11 ± 0.39 | |
| Globus Pallidus | 9.38 ± 0.39 | |
| Hypothalamus | 10.55 ± 0.36 | |
| Insula | 10.2 ± 0.26 | |
| Limbic Lobe | 9.68 ± 0.69 | |
| Mesencephalon | 9.71 ± 0.5 | |
| Myelencephalon | 9.77 ± 0.66 | |
| Occipital Lobe | 9.09 ± 0.74 | |
| Parietal Lobe | 9.86 ± 0.48 | |
| Pontine Tegmentum | 9.82 ± 0.51 | |
| Striatum | 9.18 ± 0.56 | |
| Subthalamus | 10.2 ± 0.32 | |
| Temporal Lobe | 10.11 ± 0.44 | |
| Thalamus | 9.69 ± 0.45 | |
| White Matter | 8.28 ± 0.34 | |
Mouse Brain ISH 