AutismKB 2.0

Annotation Detail for SAGE1


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Basic Information Top
Gene Symbol:SAGE1 ( CT14,SAGE )
Gene Full Name: sarcoma antigen 1
Band: Xq26.3
Quick LinksEntrez ID:55511; OMIM: 300359; Uniprot ID:SAGE1_HUMAN; ENSEMBL ID: ENSG00000181433; HGNC ID: 30369
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus2 / 5640123
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult1 / 19391210 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor6 / 26384522
glioma0 / 1068830 
head and neck tumor0 / 1363020 
kidney tumor0 / 689590 
leukemia1 / 9584210
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal7 / 33603072
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone0 / 716550 
bone marrow1 / 4880120
brain2 / 11009891
cervix0 / 481710 
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus0 / 202090 
eye0 / 2110540 
heart0 / 896260 
intestine0 / 2344720 
kidney0 / 2117770 
larynx0 / 241450 
liver0 / 2077430 
lung0 / 3369740 
lymph0 / 442700 
lymph node0 / 916100 
mammary gland0 / 1532710 
mouth0 / 670520 
muscle0 / 1077150 
nerve0 / 157680 
ovary0 / 1020510 
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta0 / 2808250 
prostate0 / 1893450 
salivary gland0 / 201550 
skin0 / 2105740 
spleen0 / 539520 
stomach0 / 966190 
testis6 / 33044218
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus0 / 2328780 
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 220793_at
Cell line Expression level Expression bar
721_B_lymphoblasts9.35
Adipocyte8.35
AdrenalCortex13.45
Adrenalgland7.7
Amygdala8.3
Appendix15.4
AtrioventricularNode10
BDCA4+_DentriticCells8
Bonemarrow10.35
BronchialEpithelialCells9.4
CD105+_Endothelial8.35
CD14+_Monocytes8.85
CD19+_BCells(neg._sel.)8.6
CD33+_Myeloid10.2
CD34+8.7
CD4+_Tcells8.2
CD56+_NKCells9.1
CD71+_EarlyErythroid8.1
CD8+_Tcells7.3
CardiacMyocytes14.5
Caudatenucleus8.05
Cerebellum8
CerebellumPeduncles10.9
CiliaryGanglion8.85
CingulateCortex9.15
Colorectaladenocarcinoma8.15
DorsalRootGanglion9.45
FetalThyroid10.05
Fetalbrain9.55
Fetalliver7.65
Fetallung6.6
GlobusPallidus7.1
Heart12.4
Hypothalamus8.7
Kidney8.45
Leukemia_chronicMyelogenousK-5627.8
Leukemia_promyelocytic-HL-607.4
Leukemialymphoblastic(MOLT-4)6.3
Liver13
Lung9.35
Lymphnode7.05
Lymphoma_burkitts(Daudi)13.95
Lymphoma_burkitts(Raji)13.15
MedullaOblongata17.65
OccipitalLobe7.25
OlfactoryBulb6.75
Ovary6.65
Pancreas7.25
PancreaticIslet9.2
ParietalLobe10.2
Pituitary11.9
Placenta8.3
Pons10.5
PrefrontalCortex10.45
Prostate9.55
Salivarygland13.9
SkeletalMuscle16.25
Skin12.05
SmoothMuscle9.2
Spinalcord9.15
SubthalamicNucleus8.75
SuperiorCervicalGanglion16.8
TemporalLobe11.15
Testis7.4
TestisGermCell6.65
TestisIntersitial7.6
TestisLeydigCell12.2
TestisSeminiferousTubule15.55
Thalamus8.95
Thymus6.5
Thyroid10.1
Tongue10
Tonsil8.5
Trachea7.1
TrigeminalGanglion22.4
Uterus6.2
UterusCorpus9.3
WholeBlood9.05
Wholebrain6.5
colon8.25
pineal_day9.86
pineal_night9.72
retina9.875
small_intestine7.8
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_12656_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2.37 ± 1.06
Basal Forebrain1.93 ± 0.25
Basal Part of Pons1.65 ± 0.45
Cerebellar Cortex1.72 ± 0.68
Cerebellar Nuclei2.22 ± 0.7
Claustrum2.81 ± 0.82
Epithalamus1.63 ± 0.8
Frontal Lobe1.82 ± 0.74
Globus Pallidus2.62 ± 0.45
Hypothalamus1.94 ± 0.67
Insula1.83 ± 0.56
Limbic Lobe2.02 ± 0.76
Mesencephalon2.12 ± 0.69
Myelencephalon1.97 ± 0.75
Occipital Lobe1.94 ± 0.5
Parietal Lobe1.95 ± 0.7
Pontine Tegmentum1.97 ± 0.7
Striatum2.11 ± 0.54
Subthalamus2.16 ± 0.74
Temporal Lobe1.82 ± 0.63
Thalamus1.91 ± 0.6
White Matter2.47 ± 0.26
Mouse Brain ISH
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018