Annotation Detail for OTUD5
Basic Information Top
| Gene Symbol: | OTUD5 ( DKFZp761A052,DUBA,MGC104871 ) |
|---|---|
| Gene Full Name: | OTU domain containing 5 |
| Band: | Xp11.23 |
| Quick Links | Entrez ID:55593; OMIM: 300713; Uniprot ID:OTUD5_HUMAN; ENSEMBL ID: ENSG00000068308; HGNC ID: 25402 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.496098
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 16 / 70761 | 226 |  |
| blastocyst | 5 / 62319 | 80 |  |
| fetus | 13 / 564012 | 23 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 1 / 23620 | 42 | |
| juvenile | 3 / 55556 | 53 | |
| adult | 115 / 1939121 | 59 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 1 / 17475 | 57 | |
| breast (mammary gland) tumor | 8 / 94178 | 84 | |
| cervical tumor | 7 / 34366 | 203 | |
| chondrosarcoma | 12 / 82823 | 144 | |
| colorectal tumor | 10 / 114246 | 87 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 10 / 119369 | 83 | |
| germ cell tumor | 24 / 263845 | 90 | |
| glioma | 6 / 106883 | 56 | |
| head and neck tumor | 21 / 136302 | 154 | |
| kidney tumor | 7 / 68959 | 101 | |
| leukemia | 6 / 95842 | 62 | |
| liver tumor | 6 / 96359 | 62 | |
| lung tumor | 14 / 103127 | 135 | |
| lymphoma | 6 / 71755 | 83 | |
| non-neoplasia | 5 / 97250 | 51 | |
| normal | 147 / 3360307 | 43 | |
| ovarian tumor | 7 / 76682 | 91 | |
| pancreatic tumor | 4 / 104616 | 38 | |
| primitive neuroectodermal tumor of the CNS | 8 / 125680 | 63 | |
| prostate cancer | 5 / 102680 | 48 | |
| retinoblastoma | 5 / 46356 | 107 | |
| skin tumor | 18 / 124949 | 144 | |
| soft tissue/muscle tissue tumor | 21 / 125191 | 167 | |
| uterine tumor | 3 / 90257 | 33 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 2 / 40015 | 49 | |
| bladder | 2 / 29757 | 67 | |
| blood | 8 / 123478 | 64 | |
| bone | 10 / 71655 | 139 | |
| bone marrow | 2 / 48801 | 40 | |
| brain | 47 / 1100989 | 42 | |
| cervix | 8 / 48171 | 166 | |
| connective tissue | 10 / 149255 | 66 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 23 / 215722 | 106 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 21 / 211054 | 99 | |
| heart | 1 / 89626 | 11 | |
| intestine | 17 / 234472 | 72 | |
| kidney | 10 / 211777 | 47 | |
| larynx | 0 / 24145 | 0 | |
| liver | 11 / 207743 | 52 | |
| lung | 23 / 336974 | 68 | |
| lymph | 2 / 44270 | 45 | |
| lymph node | 6 / 91610 | 65 | |
| mammary gland | 11 / 153271 | 71 | |
| mouth | 6 / 67052 | 89 | |
| muscle | 13 / 107715 | 120 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 8 / 102051 | 78 | |
| pancreas | 7 / 214812 | 32 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 4 / 280825 | 14 | |
| prostate | 14 / 189345 | 73 | |
| salivary gland | 13 / 20155 | 645 | |
| skin | 21 / 210574 | 99 | |
| spleen | 4 / 53952 | 74 | |
| stomach | 11 / 96619 | 113 | |
| testis | 10 / 330442 | 30 | |
| thymus | 3 / 81131 | 36 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 4 / 16999 | 235 | |
| trachea | 2 / 52413 | 38 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 8 / 232878 | 34 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: A_23_P337550
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 10.1 ± 0.32 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 10.12 ± 0.17 | |
| Basal Part of Pons | 10.36 ± 0.21 | |
| Cerebellar Cortex | 10.12 ± 0.19 | |
| Cerebellar Nuclei | 10.05 ± 0.3 | |
| Claustrum | 10.18 ± 0.28 | |
| Epithalamus | 9.99 ± 0.23 | |
| Frontal Lobe | 10.23 ± 0.21 | |
| Globus Pallidus | 9.79 ± 0.26 | |
| Hypothalamus | 10.31 ± 0.23 | |
| Insula | 10.33 ± 0.11 | |
| Limbic Lobe | 10.13 ± 0.3 | |
| Mesencephalon | 10.06 ± 0.2 | |
| Myelencephalon | 10.13 ± 0.3 | |
| Occipital Lobe | 9.92 ± 0.31 | |
| Parietal Lobe | 10.2 ± 0.25 | |
| Pontine Tegmentum | 10.06 ± 0.25 | |
| Striatum | 9.95 ± 0.34 | |
| Subthalamus | 10.18 ± 0.11 | |
| Temporal Lobe | 10.29 ± 0.23 | |
| Thalamus | 10.03 ± 0.21 | |
| White Matter | 9.86 ± 0.35 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Otud5 | CB | Cerebellum | 37.03 | |
| 58.42 | | |||
| Otud5 | CTX | Cerebral cortex | 90.16 | |
| 75.49 | | |||
| Otud5 | HIP | Hippocampal region | 66.55 | |
| 100 | | |||
| Otud5 | HPF | Hippocampal formation | 72.37 | |
| 97.08 | | |||
| Otud5 | HY | Hypothalamus | 69.85 | |
| 64.77 | | |||
| Otud5 | LSX | Lateral septal complex | 45.32 | |
| 34.75 | | |||
| Otud5 | MB | Midbrain | 13.1 | |
| 15.29 | | |||
| Otud5 | MY | Medulla | 16.23 | |
| 21.44 | | |||
| Otud5 | OLF | Olfactory bulb | 100 | |
| 100 | | |||
| Otud5 | P | Pons | 20.77 | |
| 29.16 | | |||
| Otud5 | PAL | Pallidum | 63.04 | |
| 61.1 | | |||
| Otud5 | RHP | Retrohippocampal region | 83.92 | |
| 78.61 | | |||
| Otud5 | sAMY | Striatum-like amygdalar nuclei | 100 | |
| 86.79 | | |||
| Otud5 | STR | Striatum | 87.65 | |
| 69.08 | | |||
| Otud5 | STRd | Striatum dorsal region | 85.32 | |
| 64.18 | | |||
| Otud5 | STRv | Striatum ventral region | 100 | |
| 98.34 | | |||
| Otud5 | TH | Thalamus | 28.16 | |
| 25.06 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00064148 | 17 | 388 | 404 | ATDWEATNEAIEEQVAR | Peptide Atlas |