AutismKB 2.0

Annotation Detail for STAP2


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Basic Information Top
Gene Symbol:STAP2 ( BKS,FLJ20234 )
Gene Full Name: signal transducing adaptor family member 2
Band: 19p13.3
Quick LinksEntrez ID:55620; OMIM: 607881; Uniprot ID:STAP2_HUMAN; ENSEMBL ID: ENSG00000178078; HGNC ID: 30430
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body1 / 7076114
blastocyst4 / 6231964
fetus12 / 56401221
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult58 / 193912129
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma1 / 1747557
breast (mammary gland) tumor4 / 9417842
cervical tumor0 / 343660 
chondrosarcoma1 / 8282312
colorectal tumor10 / 11424687
esophageal tumor1 / 1729057
gastrointestinal tumor7 / 11936958
germ cell tumor1 / 2638453
glioma4 / 10688337
head and neck tumor3 / 13630222
kidney tumor1 / 6895914
leukemia4 / 9584241
liver tumor3 / 9635931
lung tumor1 / 1031279
lymphoma0 / 717550 
non-neoplasia1 / 9725010
normal74 / 336030722
ovarian tumor3 / 7668239
pancreatic tumor2 / 10461619
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer1 / 1026809
retinoblastoma0 / 463560 
skin tumor2 / 12494916
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor3 / 9025733
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites3 / 4001574
bladder1 / 2975733
blood3 / 12347824
bone1 / 7165513
bone marrow0 / 488010 
brain11 / 11009899
cervix0 / 481710 
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue9 / 21572241
esophagus1 / 2020949
eye7 / 21105433
heart3 / 8962633
intestine28 / 234472119
kidney9 / 21177742
larynx0 / 241450 
liver4 / 20774319
lung7 / 33697420
lymph0 / 442700 
lymph node0 / 916100 
mammary gland5 / 15327132
mouth1 / 6705214
muscle0 / 1077150 
nerve0 / 157680 
ovary5 / 10205148
pancreas4 / 21481218
parathyroid3 / 20539146
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta2 / 2808257
prostate11 / 18934558
salivary gland0 / 201550 
skin7 / 21057433
spleen0 / 539520 
stomach7 / 9661972
testis2 / 3304426
thymus0 / 811310 
thyroid2 / 4747342
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus3 / 23287812
vascular1 / 5178019
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 221610_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts7.55
Adipocyte7.3
AdrenalCortex9.1
Adrenalgland7.25
Amygdala7.75
Appendix7.25
AtrioventricularNode6.55
BDCA4+_DentriticCells8
Bonemarrow7.15
BronchialEpithelialCells16.75
CD105+_Endothelial7.35
CD14+_Monocytes7.7
CD19+_BCells(neg._sel.)7.05
CD33+_Myeloid9.15
CD34+9.35
CD4+_Tcells8.1
CD56+_NKCells8.7
CD71+_EarlyErythroid6.7
CD8+_Tcells7.15
CardiacMyocytes9.9
Caudatenucleus6.5
Cerebellum5.95
CerebellumPeduncles8.25
CiliaryGanglion5
CingulateCortex7.5
Colorectaladenocarcinoma14.85
DorsalRootGanglion5.65
FetalThyroid8.25
Fetalbrain7.45
Fetalliver6.25
Fetallung6.2
GlobusPallidus5.25
Heart9.05
Hypothalamus7.9
Kidney7.1
Leukemia_chronicMyelogenousK-5626.6
Leukemia_promyelocytic-HL-606.35
Leukemialymphoblastic(MOLT-4)6
Liver109.2
Lung18.4
Lymphnode6.4
Lymphoma_burkitts(Daudi)9.25
Lymphoma_burkitts(Raji)10.05
MedullaOblongata6.7
OccipitalLobe6.4
OlfactoryBulb5.8
Ovary4.8
Pancreas6.3
PancreaticIslet16.75
ParietalLobe7.55
Pituitary8.5
Placenta7.45
Pons6.9
PrefrontalCortex9.05
Prostate73.25
Salivarygland6.3
SkeletalMuscle8.05
Skin8.7
SmoothMuscle8.4
Spinalcord7.8
SubthalamicNucleus6.55
SuperiorCervicalGanglion8.5
TemporalLobe6.6
Testis6.35
TestisGermCell6
TestisIntersitial6.15
TestisLeydigCell7.15
TestisSeminiferousTubule6.25
Thalamus7.4
Thymus5.95
Thyroid19.65
Tongue11.3
Tonsil7.35
Trachea7
TrigeminalGanglion7.45
Uterus6.1
UterusCorpus6.35
WholeBlood7.95
Wholebrain6.35
colon47.8
pineal_day9.06
pineal_night8.92
retina8.9
small_intestine20.85
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_6835_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2 ± 1.05
Basal Forebrain1.59 ± 0.2
Basal Part of Pons1.2 ± 0.36
Cerebellar Cortex1.39 ± 0.75
Cerebellar Nuclei1.78 ± 0.67
Claustrum2.49 ± 0.97
Epithalamus1.29 ± 0.8
Frontal Lobe1.4 ± 0.6
Globus Pallidus2.13 ± 0.27
Hypothalamus1.62 ± 0.75
Insula1.36 ± 0.48
Limbic Lobe1.55 ± 0.72
Mesencephalon1.77 ± 0.75
Myelencephalon1.6 ± 0.66
Occipital Lobe1.59 ± 0.64
Parietal Lobe1.62 ± 0.79
Pontine Tegmentum1.64 ± 0.72
Striatum1.73 ± 0.55
Subthalamus1.7 ± 0.66
Temporal Lobe1.51 ± 0.79
Thalamus1.62 ± 0.71
White Matter2.36 ± 0.69
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
AW049765CBCerebellum45.34
55.72
AW049765CTXCerebral cortex4.14
3.17
AW049765HIPHippocampal region5.01
5.55
AW049765HPFHippocampal formation4.26
4.41
AW049765HYHypothalamus0.3
0.57
AW049765LSXLateral septal complex0.26
0.33
AW049765MBMidbrain1.02
1.41
AW049765MYMedulla3.01
3.52
AW049765OLFOlfactory bulb4.76
3.59
AW049765PPons2.89
3.26
AW049765PALPallidum0.34
0.33
AW049765RHPRetrohippocampal region3.27
3.02
AW049765sAMYStriatum-like amygdalar nuclei1.48
1.24
AW049765STRStriatum2.16
2.03
AW049765STRdStriatum dorsal region2.86
2.82
AW049765STRvStriatum ventral region1.25
0.95
AW049765THThalamus0.58
0.81
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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