AutismKB 2.0

Annotation Detail for FLVCR2


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Basic Information Top
Gene Symbol:FLVCR2 ( C14orf58,CCT,EPV,FLJ20371,FLVCRL14q,MFSD7C,PVHH )
Gene Full Name: feline leukemia virus subgroup C cellular receptor family, member 2
Band: 14q24.3
Quick LinksEntrez ID:55640; OMIM: 610865; Uniprot ID:FLVC2_HUMAN; ENSEMBL ID: ENSG00000119686; HGNC ID: 20105
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus0 / 5640120 
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult1 / 19391210 
embryoid body0 / 707610 
blastocyst1 / 6231916
fetus32 / 56401256
neonate2 / 3109764
infant0 / 236200 
juvenile1 / 5555617
adult54 / 193912127
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor0 / 2638450 
glioma0 / 1068830 
head and neck tumor0 / 1363020 
kidney tumor0 / 689590 
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal1 / 33603070 
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor0 / 902570 
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor1 / 9417810
cervical tumor0 / 343660 
chondrosarcoma3 / 8282336
colorectal tumor2 / 11424617
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor21 / 26384579
glioma0 / 1068830 
head and neck tumor1 / 1363027
kidney tumor1 / 6895914
leukemia1 / 9584210
liver tumor3 / 9635931
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal97 / 336030728
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor1 / 1249498
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone0 / 716550 
bone marrow0 / 488010 
brain0 / 11009890 
cervix0 / 481710 
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus0 / 202090 
eye0 / 2110540 
heart0 / 896260 
intestine0 / 2344720 
kidney0 / 2117770 
larynx0 / 241450 
liver0 / 2077430 
lung0 / 3369740 
lymph0 / 442700 
lymph node0 / 916100 
mammary gland0 / 1532710 
mouth0 / 670520 
muscle0 / 1077150 
nerve0 / 157680 
ovary0 / 1020510 
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta0 / 2808250 
prostate0 / 1893450 
salivary gland0 / 201550 
skin0 / 2105740 
spleen0 / 539520 
stomach0 / 966190 
testis1 / 3304423
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus0 / 2328780 
vascular0 / 517800 
adipose tissue0 / 131060 
adrenal gland2 / 3319760
ascites0 / 400150 
bladder0 / 297570 
blood2 / 12347816
bone2 / 7165527
bone marrow1 / 4880120
brain12 / 110098910
cervix1 / 4817120
connective tissue2 / 14925513
ear0 / 162120 
embryonic tissue1 / 2157224
esophagus0 / 202090 
eye4 / 21105418
heart2 / 8962622
intestine7 / 23447229
kidney11 / 21177751
larynx0 / 241450 
liver3 / 20774314
lung13 / 33697438
lymph0 / 442700 
lymph node0 / 916100 
mammary gland3 / 15327119
mouth1 / 6705214
muscle2 / 10771518
nerve0 / 157680 
ovary0 / 1020510 
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta21 / 28082574
prostate3 / 18934515
salivary gland0 / 201550 
skin1 / 2105744
spleen1 / 5395218
stomach0 / 966190 
testis32 / 33044296
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus4 / 23287817
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 219316_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts5.6
Adipocyte4.6
AdrenalCortex5.75
Adrenalgland4.05
Amygdala4.9
Appendix4.85
AtrioventricularNode4.05
BDCA4+_DentriticCells5.1
Bonemarrow4.65
BronchialEpithelialCells4.6
CD105+_Endothelial4.7
CD14+_Monocytes18.95
CD19+_BCells(neg._sel.)4.95
CD33+_Myeloid11.8
CD34+5.95
CD4+_Tcells5.45
CD56+_NKCells5.5
CD71+_EarlyErythroid4.4
CD8+_Tcells4.55
CardiacMyocytes6.55
Caudatenucleus4.2
Cerebellum3.75
CerebellumPeduncles5.35
CiliaryGanglion3.5
CingulateCortex4.9
Colorectaladenocarcinoma4.75
DorsalRootGanglion3.75
FetalThyroid4.6
Fetalbrain4.7
Fetalliver4.1
Fetallung3.85
GlobusPallidus3.5
Heart6.5
Hypothalamus5.1
Kidney3.8
Leukemia_chronicMyelogenousK-5624.25
Leukemia_promyelocytic-HL-604.15
Leukemialymphoblastic(MOLT-4)3.7
Liver6.45
Lung6.55
Lymphnode3.95
Lymphoma_burkitts(Daudi)6
Lymphoma_burkitts(Raji)6.85
MedullaOblongata4.25
OccipitalLobe4.2
OlfactoryBulb3.7
Ovary3.15
Pancreas3.75
PancreaticIslet5.05
ParietalLobe5
Pituitary5.45
Placenta13.8
Pons4.45
PrefrontalCortex5.75
Prostate5.45
Salivarygland3.8
SkeletalMuscle5.55
Skin3.65
SmoothMuscle5.3
Spinalcord5
SubthalamicNucleus4.35
SuperiorCervicalGanglion5.7
TemporalLobe4.3
Testis4
TestisGermCell4.8
TestisIntersitial4.15
TestisLeydigCell4.65
TestisSeminiferousTubule4.1
Thalamus4.8
Thymus3.65
Thyroid5.95
Tongue4.8
Tonsil4.65
Trachea3.95
TrigeminalGanglion4.75
Uterus3.85
UterusCorpus4.25
WholeBlood5.65
Wholebrain3.9
colon4.85
pineal_day5.9
pineal_night5.76
retina31.75
small_intestine4.6
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_5809_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2.7 ± 1.03
Basal Forebrain1.99 ± 0.33
Basal Part of Pons2.18 ± 0.76
Cerebellar Cortex1.94 ± 0.53
Cerebellar Nuclei2.72 ± 0.79
Claustrum3.05 ± 0.84
Epithalamus2.24 ± 0.58
Frontal Lobe2.16 ± 0.67
Globus Pallidus3.73 ± 0.79
Hypothalamus2.26 ± 0.88
Insula2.04 ± 0.73
Limbic Lobe2.25 ± 0.77
Mesencephalon2.49 ± 0.73
Myelencephalon2.33 ± 0.67
Occipital Lobe2.57 ± 0.77
Parietal Lobe2.34 ± 0.83
Pontine Tegmentum2.38 ± 0.81
Striatum2.77 ± 0.72
Subthalamus2.69 ± 0.89
Temporal Lobe2.15 ± 0.56
Thalamus2.38 ± 0.57
White Matter3.08 ± 0.68
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
BC011209CBCerebellum0
0
BC011209CTXCerebral cortex0
0
BC011209HIPHippocampal region0
0
BC011209HPFHippocampal formation0
0
BC011209HYHypothalamus0
0
BC011209LSXLateral septal complex0
0
BC011209MBMidbrain0
0
BC011209MYMedulla0
0
BC011209OLFOlfactory bulb0
0
BC011209PPons0
0
BC011209PALPallidum0
0
BC011209RHPRetrohippocampal region0
0
BC011209sAMYStriatum-like amygdalar nuclei0
0
BC011209STRStriatum0
0
BC011209STRdStriatum dorsal region0
0
BC011209STRvStriatum ventral region0
0
BC011209THThalamus0
0
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp01428998 17 152 168 TIALTGSALNCLGAWVK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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