AutismKB 2.0

Annotation Detail for PEX26


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Basic Information Top
Gene Symbol:PEX26 ( FLJ20695,PEX26M1T,Pex26pM1T )
Gene Full Name: peroxisomal biogenesis factor 26
Band: 22q11.21
Quick LinksEntrez ID:55670; OMIM: 608666; Uniprot ID:PEX26_HUMAN; ENSEMBL ID: ENSG00000215193; HGNC ID: 22965
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body1 / 7076114
blastocyst0 / 623190 
fetus7 / 56401212
neonate0 / 310970 
infant0 / 236200 
juvenile1 / 5555617
adult17 / 19391218
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor1 / 9417810
cervical tumor1 / 3436629
chondrosarcoma0 / 828230 
colorectal tumor3 / 11424626
esophageal tumor0 / 172900 
gastrointestinal tumor2 / 11936916
germ cell tumor4 / 26384515
glioma5 / 10688346
head and neck tumor3 / 13630222
kidney tumor0 / 689590 
leukemia1 / 9584210
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia1 / 9725010
normal39 / 336030711
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS1 / 1256807
prostate cancer2 / 10268019
retinoblastoma3 / 4635664
skin tumor1 / 1249498
soft tissue/muscle tissue tumor1 / 1251917
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood1 / 1234788
bone0 / 716550 
bone marrow0 / 488010 
brain20 / 110098918
cervix1 / 4817120
connective tissue1 / 1492556
ear0 / 162120 
embryonic tissue1 / 2157224
esophagus0 / 202090 
eye3 / 21105414
heart0 / 896260 
intestine8 / 23447234
kidney9 / 21177742
larynx0 / 241450 
liver0 / 2077430 
lung2 / 3369745
lymph0 / 442700 
lymph node0 / 916100 
mammary gland1 / 1532716
mouth3 / 6705244
muscle0 / 1077150 
nerve0 / 157680 
ovary0 / 1020510 
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta2 / 2808257
prostate2 / 18934510
salivary gland0 / 201550 
skin2 / 2105749
spleen2 / 5395237
stomach2 / 9661920
testis4 / 33044212
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus3 / 23287812
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 219180_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts46.4
Adipocyte10.3
AdrenalCortex7.7
Adrenalgland6.3
Amygdala8.55
Appendix7.4
AtrioventricularNode5.65
BDCA4+_DentriticCells24.55
Bonemarrow7.2
BronchialEpithelialCells7.35
CD105+_Endothelial21.5
CD14+_Monocytes10.8
CD19+_BCells(neg._sel.)29.6
CD33+_Myeloid31.7
CD34+48.5
CD4+_Tcells9.25
CD56+_NKCells36.35
CD71+_EarlyErythroid14.35
CD8+_Tcells8.5
CardiacMyocytes9.35
Caudatenucleus6.65
Cerebellum6.35
CerebellumPeduncles8.35
CiliaryGanglion5.15
CingulateCortex10.75
Colorectaladenocarcinoma7.4
DorsalRootGanglion5.6
FetalThyroid7.15
Fetalbrain7.35
Fetalliver6.35
Fetallung5.95
GlobusPallidus5.55
Heart8.05
Hypothalamus11.95
Kidney5.8
Leukemia_chronicMyelogenousK-5627.7
Leukemia_promyelocytic-HL-607.35
Leukemialymphoblastic(MOLT-4)6
Liver9.7
Lung8.1
Lymphnode6.45
Lymphoma_burkitts(Daudi)9.45
Lymphoma_burkitts(Raji)10.45
MedullaOblongata7.35
OccipitalLobe6.75
OlfactoryBulb5.85
Ovary4.85
Pancreas5.95
PancreaticIslet8.05
ParietalLobe7.8
Pituitary8.75
Placenta7.55
Pons8.75
PrefrontalCortex9.25
Prostate8.7
Salivarygland5.45
SkeletalMuscle7.55
Skin5.85
SmoothMuscle8.5
Spinalcord15.2
SubthalamicNucleus7.1
SuperiorCervicalGanglion8.3
TemporalLobe12.7
Testis6.35
TestisGermCell5.75
TestisIntersitial6.35
TestisLeydigCell6.7
TestisSeminiferousTubule6.4
Thalamus10.35
Thymus5.85
Thyroid9.4
Tongue7.55
Tonsil6.55
Trachea5.9
TrigeminalGanglion7.6
Uterus4.8
UterusCorpus6.05
WholeBlood10.6
Wholebrain10.55
colon18
pineal_day9.44
pineal_night9.16
retina8.85
small_intestine9.7
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_1159_PI416573500
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala7.28 ± 0.33
Basal Forebrain7.11 ± 0.29
Basal Part of Pons7.23 ± 0.3
Cerebellar Cortex6.84 ± 0.2
Cerebellar Nuclei6.94 ± 0.5
Claustrum7.56 ± 0.41
Epithalamus6.71 ± 0.3
Frontal Lobe7.04 ± 0.34
Globus Pallidus7.2 ± 0.25
Hypothalamus7.04 ± 0.39
Insula7.03 ± 0.42
Limbic Lobe7.37 ± 0.35
Mesencephalon7.04 ± 0.41
Myelencephalon7.14 ± 0.3
Occipital Lobe7.29 ± 0.24
Parietal Lobe7.23 ± 0.34
Pontine Tegmentum7.02 ± 0.24
Striatum7.19 ± 0.3
Subthalamus7.12 ± 0.3
Temporal Lobe7.11 ± 0.31
Thalamus7.01 ± 0.29
White Matter6.45 ± 0.46
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Pex26CBCerebellum22.66
35.99
Pex26CTXCerebral cortex69.32
61.61
Pex26HIPHippocampal region35.85
56.63
Pex26HPFHippocampal formation41.09
50.69
Pex26HYHypothalamus3.88
3.25
Pex26LSXLateral septal complex40.46
31.74
Pex26MBMidbrain20.72
19.88
Pex26MYMedulla33.97
38.52
Pex26OLFOlfactory bulb79.5
85.38
Pex26PPons20.72
23.56
Pex26PALPallidum11.49
9.88
Pex26RHPRetrohippocampal region51
43.95
Pex26sAMYStriatum-like amygdalar nuclei20.62
15.89
Pex26STRStriatum25.51
20.08
Pex26STRdStriatum dorsal region15.24
11.12
Pex26STRvStriatum ventral region52.7
42.16
Pex26THThalamus14.42
16.56
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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