Annotation Detail for TRMU
Basic Information Top
| Gene Symbol: | TRMU ( MGC99627,MTO2,MTU1,TRMT,TRMT1,TRNT1 ) |
|---|---|
| Gene Full Name: | tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase |
| Band: | 22q13.31 |
| Quick Links | Entrez ID:55687; OMIM: 610230; Uniprot ID:MTU1_HUMAN; ENSEMBL ID: ENSG00000100416; HGNC ID: 25481 |
| Relate to Another Database: | SFARIGene; denovo-db |
Unigene EST- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 213634_s_at
| Cell line | Expression level | Expression bar |
|---|---|---|
 | ||
| 721_B_lymphoblasts | 22.85 |  |
| Adipocyte | 13.8 | |
| AdrenalCortex | 21.2 | |
| Adrenalgland | 11.3 | |
| Amygdala | 13.75 | |
| Appendix | 13.45 | |
| AtrioventricularNode | 10.85 | |
| BDCA4+_DentriticCells | 21.95 | |
| Bonemarrow | 13.25 | |
| BronchialEpithelialCells | 13.4 | |
| CD105+_Endothelial | 16.1 | |
| CD14+_Monocytes | 13.95 | |
| CD19+_BCells(neg._sel.) | 14 | |
| CD33+_Myeloid | 16.5 | |
| CD34+ | 26.7 | |
| CD4+_Tcells | 30.3 | |
| CD56+_NKCells | 18.4 | |
| CD71+_EarlyErythroid | 12.2 | |
| CD8+_Tcells | 48.75 | |
| CardiacMyocytes | 18.55 | |
| Caudatenucleus | 11.85 | |
| Cerebellum | 10.05 | |
| CerebellumPeduncles | 28.1 | |
| CiliaryGanglion | 9.55 |  |
| CingulateCortex | 14.85 | |
| Colorectaladenocarcinoma | 13.45 | |
| DorsalRootGanglion | 10.2 | |
| FetalThyroid | 16.25 | |
| Fetalbrain | 11.4 | |
| Fetalliver | 11.2 | |
| Fetallung | 10.65 | |
| GlobusPallidus | 10.8 | |
| Heart | 19.1 | |
| Hypothalamus | 14.4 | |
| Kidney | 11.35 | |
| Leukemia_chronicMyelogenousK-562 | 11.65 | |
| Leukemia_promyelocytic-HL-60 | 11.55 | |
| Leukemialymphoblastic(MOLT-4) | 10.75 | |
| Liver | 17.8 | |
| Lung | 14.55 | |
| Lymphnode | 11.2 | |
| Lymphoma_burkitts(Daudi) | 16.95 | |
| Lymphoma_burkitts(Raji) | 40.85 | |
| MedullaOblongata | 11.8 | |
| OccipitalLobe | 11.6 | |
| OlfactoryBulb | 10.75 | |
| Ovary | 8.85 | |
| Pancreas | 10.95 | |
| PancreaticIslet | 14.05 | |
| ParietalLobe | 14.3 | |
| Pituitary | 14.85 | |
| Placenta | 12.95 | |
| Pons | 12.5 | |
| PrefrontalCortex | 16.45 | |
| Prostate | 19.9 | |
| Salivarygland | 10.45 | |
| SkeletalMuscle | 18.9 | |
| Skin | 10.8 | |
| SmoothMuscle | 15.25 | |
| Spinalcord | 14.15 | |
| SubthalamicNucleus | 15.1 | |
| SuperiorCervicalGanglion | 15.25 | |
| TemporalLobe | 14.2 | |
| Testis | 11.1 | |
| TestisGermCell | 10.8 | |
| TestisIntersitial | 11.2 | |
| TestisLeydigCell | 13.5 | |
| TestisSeminiferousTubule | 12.6 | |
| Thalamus | 16.85 | |
| Thymus | 10.45 | |
| Thyroid | 17.35 | |
| Tongue | 20.5 | |
| Tonsil | 12.95 | |
| Trachea | 10.85 | |
| TrigeminalGanglion | 14.6 | |
| Uterus | 12.65 | |
| UterusCorpus | 12.1 | |
| WholeBlood | 14.5 | |
| Wholebrain | 9.2 | |
| colon | 13.65 | |
| pineal_day | 23.52 | |
| pineal_night | 24.68 | |
| retina | 16 | |
| small_intestine | 12.85 | |
- Probe name: CUST_15092_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.56 ± 0.29 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 4.44 ± 0.29 | |
| Basal Part of Pons | 4.69 ± 0.39 | |
| Cerebellar Cortex | 4.76 ± 0.49 | |
| Cerebellar Nuclei | 4.24 ± 0.33 | |
| Claustrum | 4.29 ± 0.66 | |
| Epithalamus | 4.67 ± 1.09 | |
| Frontal Lobe | 4.72 ± 0.46 | |
| Globus Pallidus | 4.6 ± 0.25 | |
| Hypothalamus | 4.48 ± 0.52 | |
| Insula | 4.55 ± 0.39 | |
| Limbic Lobe | 4.61 ± 0.49 | |
| Mesencephalon | 4.53 ± 0.42 | |
| Myelencephalon | 4.57 ± 0.48 | |
| Occipital Lobe | 4.37 ± 0.4 | |
| Parietal Lobe | 4.55 ± 0.47 | |
| Pontine Tegmentum | 4.46 ± 0.5 | |
| Striatum | 4.19 ± 0.44 | |
| Subthalamus | 4.28 ± 0.4 | |
| Temporal Lobe | 4.65 ± 0.45 | |
| Thalamus | 4.42 ± 0.45 | |
| White Matter | 5.19 ± 0.45 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Trmu | CB | Cerebellum | 5.97 |  |
| 6.32 | | |||
| Trmu | CTX | Cerebral cortex | 5.87 | |
| 4.55 | | |||
| Trmu | HIP | Hippocampal region | 10 | |
| 8.89 | | |||
| Trmu | HPF | Hippocampal formation | 6.78 | |
| 5.83 | | |||
| Trmu | HY | Hypothalamus | 2.46 | |
| 1.82 | | |||
| Trmu | LSX | Lateral septal complex | 1.04 | |
| 0.76 | | |||
| Trmu | MB | Midbrain | 4.66 | |
| 4.24 | | |||
| Trmu | MY | Medulla | 6.97 | |
| 7.22 | | |||
| Trmu | OLF | Olfactory bulb | 6.16 | |
| 5.42 | | |||
| Trmu | P | Pons | 4.24 | |
| 4.08 | | |||
| Trmu | PAL | Pallidum | 1.09 | |
| 0.83 | | |||
| Trmu | RHP | Retrohippocampal region | 1.77 | |
| 1.82 | | |||
| Trmu | sAMY | Striatum-like amygdalar nuclei | 0.21 | |
| 0.16 | | |||
| Trmu | STR | Striatum | 0.59 | |
| 0.59 | | |||
| Trmu | STRd | Striatum dorsal region | 0.48 | |
| 0.58 | | |||
| Trmu | STRv | Striatum ventral region | 0.81 | |
| 0.68 | | |||
| Trmu | TH | Thalamus | 3.83 | |
| 3.16 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00499106 | 15 | 38 | 52 | NWDSLDEHGVCTADK | Peptide Atlas |