AutismKB 2.0

Annotation Detail for LUC7L


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Basic Information Top
Gene Symbol:LUC7L ( FLJ10231,LUC7-LIKE,LUC7B1,Luc7,SR+89,hLuc7B1 )
Gene Full Name: LUC7-like (S. cerevisiae)
Band: 16p13.3
Quick LinksEntrez ID:55692; OMIM: 607782; Uniprot ID:LUC7L_HUMAN; ENSEMBL ID: ENSG00000007392; HGNC ID: 6723
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body8 / 70761113
blastocyst13 / 62319208
fetus52 / 56401292
neonate4 / 31097128
infant1 / 2362042
juvenile1 / 5555617
adult132 / 193912168
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma0 / 174750 
breast (mammary gland) tumor8 / 9417884
cervical tumor3 / 3436687
chondrosarcoma3 / 8282336
colorectal tumor4 / 11424635
esophageal tumor1 / 1729057
gastrointestinal tumor7 / 11936958
germ cell tumor4 / 26384515
glioma7 / 10688365
head and neck tumor15 / 136302110
kidney tumor3 / 6895943
leukemia0 / 958420 
liver tumor9 / 9635993
lung tumor12 / 103127116
lymphoma0 / 717550 
non-neoplasia5 / 9725051
normal240 / 336030771
ovarian tumor2 / 7668226
pancreatic tumor6 / 10461657
primitive neuroectodermal tumor of the CNS11 / 12568087
prostate cancer0 / 1026800 
retinoblastoma3 / 4635664
skin tumor7 / 12494956
soft tissue/muscle tissue tumor6 / 12519147
uterine tumor6 / 9025766
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue3 / 13106228
adrenal gland4 / 33197120
ascites2 / 4001549
bladder1 / 2975733
blood5 / 12347840
bone3 / 7165541
bone marrow0 / 488010 
brain113 / 1100989102
cervix6 / 48171124
connective tissue5 / 14925533
ear0 / 162120 
embryonic tissue31 / 215722143
esophagus1 / 2020949
eye16 / 21105475
heart5 / 8962655
intestine14 / 23447259
kidney13 / 21177761
larynx2 / 2414582
liver12 / 20774357
lung23 / 33697468
lymph0 / 442700 
lymph node0 / 916100 
mammary gland10 / 15327165
mouth6 / 6705289
muscle1 / 1077159
nerve2 / 15768126
ovary4 / 10205139
pancreas9 / 21481241
parathyroid1 / 2053948
pharynx0 / 413280 
pituitary gland2 / 16585120
placenta8 / 28082528
prostate5 / 18934526
salivary gland0 / 201550 
skin8 / 21057437
spleen14 / 53952259
stomach5 / 9661951
testis12 / 33044236
thymus24 / 81131295
thyroid8 / 47473168
tonsil0 / 169990 
trachea1 / 5241319
umbilical cord2 / 13680146
uterus19 / 23287881
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 220143_x_at
Cell line Expression level Expression bar
721_B_lymphoblasts30.45
Adipocyte21.8
AdrenalCortex32.55
Adrenalgland19.6
Amygdala21.7
Appendix25.5
AtrioventricularNode20.15
BDCA4+_DentriticCells31.8
Bonemarrow24.5
BronchialEpithelialCells18.5
CD105+_Endothelial25.95
CD14+_Monocytes22.8
CD19+_BCells(neg._sel.)27.9
CD33+_Myeloid31.85
CD34+34.4
CD4+_Tcells80.25
CD56+_NKCells30.85
CD71+_EarlyErythroid26.3
CD8+_Tcells68.85
CardiacMyocytes27.15
Caudatenucleus22.65
Cerebellum21.25
CerebellumPeduncles29.9
CiliaryGanglion17.45
CingulateCortex36.65
Colorectaladenocarcinoma26.5
DorsalRootGanglion25.75
FetalThyroid25.35
Fetalbrain38.15
Fetalliver21.9
Fetallung26.3
GlobusPallidus17.3
Heart18.55
Hypothalamus31
Kidney17.85
Leukemia_chronicMyelogenousK-56230.45
Leukemia_promyelocytic-HL-6022.8
Leukemialymphoblastic(MOLT-4)29.8
Liver26.6
Lung29
Lymphnode29.75
Lymphoma_burkitts(Daudi)33.8
Lymphoma_burkitts(Raji)57.4
MedullaOblongata33.05
OccipitalLobe23.3
OlfactoryBulb22.75
Ovary16.75
Pancreas20.3
PancreaticIslet26.85
ParietalLobe27.75
Pituitary38.4
Placenta26.3
Pons24.65
PrefrontalCortex38.05
Prostate31.45
Salivarygland20.65
SkeletalMuscle28.3
Skin19
SmoothMuscle29.25
Spinalcord27.2
SubthalamicNucleus25.65
SuperiorCervicalGanglion27.9
TemporalLobe24.4
Testis29.85
TestisGermCell26.25
TestisIntersitial22.2
TestisLeydigCell31
TestisSeminiferousTubule22.55
Thalamus26.85
Thymus22.3
Thyroid33.25
Tongue17.85
Tonsil23.15
Trachea17.9
TrigeminalGanglion24.45
Uterus46.25
UterusCorpus23.6
WholeBlood9.4
Wholebrain41.75
colon23.7
pineal_day65.6
pineal_night42.92
retina31.15
small_intestine22.35
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_6717_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala9.82 ± 0.22
Basal Forebrain9.7 ± 0.15
Basal Part of Pons9.55 ± 0.2
Cerebellar Cortex9.72 ± 0.19
Cerebellar Nuclei9.41 ± 0.19
Claustrum9.96 ± 0.47
Epithalamus9.42 ± 0.21
Frontal Lobe9.46 ± 0.24
Globus Pallidus9.64 ± 0.13
Hypothalamus9.4 ± 0.28
Insula9.51 ± 0.28
Limbic Lobe9.8 ± 0.33
Mesencephalon9.58 ± 0.22
Myelencephalon9.55 ± 0.24
Occipital Lobe9.93 ± 0.35
Parietal Lobe9.62 ± 0.24
Pontine Tegmentum9.53 ± 0.26
Striatum9.59 ± 0.28
Subthalamus9.34 ± 0.11
Temporal Lobe9.56 ± 0.31
Thalamus9.44 ± 0.18
White Matter10.26 ± 0.24
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Luc7lCBCerebellum16.05
19.46
Luc7lCTXCerebral cortex38.94
30.69
Luc7lHIPHippocampal region54.37
73.32
Luc7lHPFHippocampal formation51.92
60.36
Luc7lHYHypothalamus39.92
38.49
Luc7lLSXLateral septal complex8.32
6.1
Luc7lMBMidbrain27.71
29.33
Luc7lMYMedulla22.94
30.1
Luc7lOLFOlfactory bulb44.3
38.73
Luc7lPPons29.27
36.8
Luc7lPALPallidum37.98
37.65
Luc7lRHPRetrohippocampal region44.25
35.85
Luc7lsAMYStriatum-like amygdalar nuclei54.78
46.27
Luc7lSTRStriatum30.05
23.66
Luc7lSTRdStriatum dorsal region24.86
19.19
Luc7lSTRvStriatum ventral region45.16
34.32
Luc7lTHThalamus40.12
37.13
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
LUC7L_HUMAN_230 10 230 239 KTVAEKQEKR PRIDE
PAp00007166 16 38 53 SHLLDCCPHDILAGTR Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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