Annotation Detail for N4BP2
Basic Information Top
| Gene Symbol: | N4BP2 ( B3BP,FLJ10680,KIAA1413 ) |
|---|---|
| Gene Full Name: | NEDD4 binding protein 2 |
| Band: | 4p14 |
| Quick Links | Entrez ID:55728; OMIM: NA; Uniprot ID:N4BP2_HUMAN; ENSEMBL ID: ENSG00000078177; HGNC ID: 29851 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.391463
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 6 / 70761 | 84 |  |
| blastocyst | 4 / 62319 | 64 | |
| fetus | 13 / 564012 | 23 |  |
| neonate | 1 / 31097 | 32 | |
| infant | 1 / 23620 | 42 | |
| juvenile | 2 / 55556 | 35 | |
| adult | 15 / 1939121 | 7 |  |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 2 / 82823 | 24 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 3 / 119369 | 25 | |
| germ cell tumor | 9 / 263845 | 34 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 1 / 71755 | 13 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 51 / 3360307 | 15 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 6 / 125680 | 47 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 2 / 46356 | 43 | |
| skin tumor | 2 / 124949 | 16 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 2 / 90257 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 2 / 123478 | 16 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 6 / 1100989 | 5 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 2 / 149255 | 13 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 13 / 215722 | 60 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 3 / 211054 | 14 | |
| heart | 2 / 89626 | 22 | |
| intestine | 2 / 234472 | 8 | |
| kidney | 3 / 211777 | 14 | |
| larynx | 0 / 24145 | 0 | |
| liver | 2 / 207743 | 9 | |
| lung | 3 / 336974 | 8 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 1 / 91610 | 10 | |
| mammary gland | 1 / 153271 | 6 | |
| mouth | 1 / 67052 | 14 | |
| muscle | 3 / 107715 | 27 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 1 / 214812 | 4 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 4 / 280825 | 14 | |
| prostate | 0 / 189345 | 0 | |
| salivary gland | 1 / 20155 | 49 | |
| skin | 2 / 210574 | 9 | |
| spleen | 2 / 53952 | 37 | |
| stomach | 1 / 96619 | 10 | |
| testis | 4 / 330442 | 12 | |
| thymus | 5 / 81131 | 61 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 2 / 52413 | 38 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 3 / 232878 | 12 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_24_P222114
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 5.51 ± 0.49 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 5.64 ± 0.23 | |
| Basal Part of Pons | 4.91 ± 0.44 | |
| Cerebellar Cortex | 5.64 ± 0.31 | |
| Cerebellar Nuclei | 4.64 ± 0.53 | |
| Claustrum | 5.13 ± 0.93 | |
| Epithalamus | 5.92 ± 0.48 | |
| Frontal Lobe | 4.72 ± 0.53 | |
| Globus Pallidus | 5.01 ± 0.49 | |
| Hypothalamus | 5.76 ± 0.57 | |
| Insula | 5.41 ± 0.53 | |
| Limbic Lobe | 5.04 ± 0.67 | |
| Mesencephalon | 5.25 ± 0.63 | |
| Myelencephalon | 5.16 ± 0.57 | |
| Occipital Lobe | 5.86 ± 0.51 | |
| Parietal Lobe | 5.24 ± 0.46 | |
| Pontine Tegmentum | 5.21 ± 0.65 | |
| Striatum | 4.86 ± 0.5 | |
| Subthalamus | 4.69 ± 0.35 | |
| Temporal Lobe | 5.21 ± 0.5 | |
| Thalamus | 5 ± 0.4 | |
| White Matter | 4.94 ± 0.38 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| B3bp | CB | Cerebellum | 10.52 | |
| 13.74 | | |||
| B3bp | CTX | Cerebral cortex | 2.25 | |
| 2.09 | | |||
| B3bp | HIP | Hippocampal region | 7 | |
| 7.24 | | |||
| B3bp | HPF | Hippocampal formation | 6.46 | |
| 6.25 | | |||
| B3bp | HY | Hypothalamus | 8.29 | |
| 6.07 | | |||
| B3bp | LSX | Lateral septal complex | 6.47 | |
| 4.44 | | |||
| B3bp | MB | Midbrain | 2.78 | |
| 2.54 | | |||
| B3bp | MY | Medulla | 10.6 | |
| 11.09 | | |||
| B3bp | OLF | Olfactory bulb | 9.48 | |
| 7.59 | | |||
| B3bp | P | Pons | 6.88 | |
| 6.79 | | |||
| B3bp | PAL | Pallidum | 6.98 | |
| 5.95 | | |||
| B3bp | RHP | Retrohippocampal region | 5.49 | |
| 4.76 | | |||
| B3bp | sAMY | Striatum-like amygdalar nuclei | 22.74 | |
| 16.25 | | |||
| B3bp | STR | Striatum | 5.66 | |
| 4.58 | | |||
| B3bp | STRd | Striatum dorsal region | 1.46 | |
| 1.58 | | |||
| B3bp | STRv | Striatum ventral region | 11.39 | |
| 8.53 | | |||
| B3bp | TH | Thalamus | 1.93 | |
| 1.89 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00010895 | 15 | 827 | 841 | LVNSVSVNTDCVQQR | Peptide Atlas |