AutismKB 2.0

Annotation Detail for CNDP2


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Basic Information Top
Gene Symbol:CNDP2 ( CN2,CPGL,FLJ10830,HsT2298,PEPA )
Gene Full Name: CNDP dipeptidase 2 (metallopeptidase M20 family)
Band: 18q22.3
Quick LinksEntrez ID:55748; OMIM: 169800; Uniprot ID:CNDP2_HUMAN; ENSEMBL ID: ENSG00000133313; HGNC ID: 24437
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body11 / 70761155
blastocyst11 / 62319176
fetus71 / 564012125
neonate9 / 31097289
infant8 / 23620338
juvenile9 / 55556161
adult264 / 1939121136
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor2 / 12794156
bladder carcinoma1 / 1747557
breast (mammary gland) tumor27 / 94178286
cervical tumor4 / 34366116
chondrosarcoma8 / 8282396
colorectal tumor20 / 114246175
esophageal tumor1 / 1729057
gastrointestinal tumor13 / 119369108
germ cell tumor95 / 263845360
glioma21 / 106883196
head and neck tumor32 / 136302234
kidney tumor32 / 68959464
leukemia14 / 95842146
liver tumor12 / 96359124
lung tumor15 / 103127145
lymphoma22 / 71755306
non-neoplasia25 / 97250257
normal688 / 3360307204
ovarian tumor9 / 76682117
pancreatic tumor16 / 104616152
primitive neuroectodermal tumor of the CNS13 / 125680103
prostate cancer32 / 102680311
retinoblastoma6 / 46356129
skin tumor31 / 124949248
soft tissue/muscle tissue tumor4 / 12519131
uterine tumor19 / 90257210
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue2 / 13106152
adrenal gland4 / 33197120
ascites9 / 40015224
bladder10 / 29757336
blood33 / 123478267
bone6 / 7165583
bone marrow8 / 48801163
brain318 / 1100989288
cervix9 / 48171186
connective tissue20 / 149255133
ear4 / 16212246
embryonic tissue30 / 215722139
esophagus2 / 2020998
eye20 / 21105494
heart8 / 8962689
intestine54 / 234472230
kidney106 / 211777500
larynx1 / 2414541
liver21 / 207743101
lung52 / 336974154
lymph20 / 44270451
lymph node12 / 91610130
mammary gland30 / 153271195
mouth16 / 67052238
muscle4 / 10771537
nerve1 / 1576863
ovary17 / 102051166
pancreas21 / 21481297
parathyroid3 / 20539146
pharynx11 / 41328266
pituitary gland0 / 165850 
placenta81 / 280825288
prostate67 / 189345353
salivary gland4 / 20155198
skin42 / 210574199
spleen39 / 53952722
stomach6 / 9661962
testis36 / 330442108
thymus18 / 81131221
thyroid16 / 47473337
tonsil3 / 16999176
trachea8 / 52413152
umbilical cord1 / 1368073
uterus43 / 232878184
vascular6 / 51780115
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 217752_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts479.95
Adipocyte130.2
AdrenalCortex83.2
Adrenalgland77.9
Amygdala322.95
Appendix56.35
AtrioventricularNode47.65
BDCA4+_DentriticCells739.4
Bonemarrow58.5
BronchialEpithelialCells363.25
CD105+_Endothelial224.15
CD14+_Monocytes392.2
CD19+_BCells(neg._sel.)389.4
CD33+_Myeloid412.3
CD34+350.05
CD4+_Tcells234.5
CD56+_NKCells388
CD71+_EarlyErythroid10.95
CD8+_Tcells257.7
CardiacMyocytes41.75
Caudatenucleus348.2
Cerebellum188.9
CerebellumPeduncles128.45
CiliaryGanglion22.25
CingulateCortex296.75
Colorectaladenocarcinoma56.75
DorsalRootGanglion58.9
FetalThyroid241.35
Fetalbrain116
Fetalliver77.45
Fetallung246.05
GlobusPallidus140.45
Heart151.05
Hypothalamus651.6
Kidney934.15
Leukemia_chronicMyelogenousK-562124.85
Leukemia_promyelocytic-HL-60110.45
Leukemialymphoblastic(MOLT-4)58.4
Liver440.1
Lung530.6
Lymphnode193.3
Lymphoma_burkitts(Daudi)171.7
Lymphoma_burkitts(Raji)245.7
MedullaOblongata261.2
OccipitalLobe286.3
OlfactoryBulb277.85
Ovary15.35
Pancreas131.7
PancreaticIslet265.8
ParietalLobe326.15
Pituitary167.1
Placenta322.9
Pons188.6
PrefrontalCortex636.4
Prostate851.9
Salivarygland133.35
SkeletalMuscle70.1
Skin59.65
SmoothMuscle76.85
Spinalcord537.05
SubthalamicNucleus201.45
SuperiorCervicalGanglion55.55
TemporalLobe131.75
Testis81.05
TestisGermCell57.4
TestisIntersitial47.3
TestisLeydigCell29.4
TestisSeminiferousTubule21.8
Thalamus380.95
Thymus214.4
Thyroid843.1
Tongue95.4
Tonsil148.9
Trachea173.85
TrigeminalGanglion28.65
Uterus172.5
UterusCorpus39.65
WholeBlood171.6
Wholebrain364.15
colon326.15
pineal_day328.1
pineal_night285.66
retina435.5
small_intestine879.65
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_24_P151084
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala8.1 ± 0.44
Basal Forebrain8.12 ± 0.39
Basal Part of Pons7.89 ± 0.37
Cerebellar Cortex7.57 ± 0.23
Cerebellar Nuclei8.32 ± 0.43
Claustrum8.33 ± 0.34
Epithalamus7.79 ± 0.29
Frontal Lobe7.86 ± 0.4
Globus Pallidus9.03 ± 0.26
Hypothalamus7.77 ± 0.48
Insula7.81 ± 0.42
Limbic Lobe8.07 ± 0.54
Mesencephalon8.11 ± 0.42
Myelencephalon8.09 ± 0.47
Occipital Lobe7.96 ± 0.39
Parietal Lobe8.01 ± 0.5
Pontine Tegmentum8.01 ± 0.45
Striatum8.38 ± 0.54
Subthalamus7.99 ± 0.23
Temporal Lobe7.97 ± 0.37
Thalamus8.17 ± 0.32
White Matter9.16 ± 0.45
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Cndp2CBCerebellum64.19
100
Cndp2CTXCerebral cortex100
100
Cndp2HIPHippocampal region71.31
100
Cndp2HPFHippocampal formation73
100
Cndp2HYHypothalamus33.04
34.2
Cndp2LSXLateral septal complex45.68
40.51
Cndp2MBMidbrain54.84
63.52
Cndp2MYMedulla60.44
79.6
Cndp2OLFOlfactory bulb100
99.17
Cndp2PPons46.9
65.61
Cndp2PALPallidum54.9
61.1
Cndp2RHPRetrohippocampal region75.56
73.31
Cndp2sAMYStriatum-like amygdalar nuclei90.48
75.98
Cndp2STRStriatum64.43
53.84
Cndp2STRdStriatum dorsal region60.8
50.6
Cndp2STRvStriatum ventral region72.74
59.33
Cndp2THThalamus75.77
82.97
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
CNDP2_HUMAN_0 0 0 0 EGGSIPVTLTFQEATGK PRIDE
CNDP2_HUMAN_0 0 0 0 MMEVAAADVK PRIDE
CNDP2_HUMAN_0 0 0 0 QKLPDGSEIPLPPILLGR PRIDE
CNDP2_HUMAN_0 0 0 0 WRYPSLSLHGIEGAFSGSGAK PRIDE
CNDP2_HUMAN_0 0 0 0 WVAIQSVSAWPEKR PRIDE
CNDP2_HUMAN_110 12 110 121 GWDSEPFTLVER PRIDE
CNDP2_HUMAN_128 21 128 148 GSTDDKGPVAGWINALEAYQK PRIDE
CNDP2_HUMAN_149 10 149 158 TGQEIPVNVR PRIDE
CNDP2_HUMAN_150 10 150 159 TGQEIPVNVR PRIDE
CNDP2_HUMAN_2 16 2 17 AALTTLFKYIDENQDR PRIDE
CNDP2_HUMAN_225 29 225 253 DLHSGVYGGSVHEAMTDLILLMGSLVDKR PRIDE
CNDP2_HUMAN_24 14 24 37 WVAIQSVSAWPEKR PRIDE
CNDP2_HUMAN_25 13 25 37 WVAIQSVSAWPEK PRIDE
CNDP2_HUMAN_254 21 254 274 GNILIPGINEAVAAVTEEEHK PRIDE
CNDP2_HUMAN_255 21 255 275 GNILIPGINEAVAAVTEEEHK PRIDE
CNDP2_HUMAN_289 13 289 301 DVGAQILLHSHKK PRIDE
CNDP2_HUMAN_343 20 343 362 LVPNMTPEVVGEQVTSYLTK PRIDE
CNDP2_HUMAN_344 20 344 363 LVPNMTPEVVGEQVTSYLTK PRIDE
CNDP2_HUMAN_402 11 402 412 TVFGVEPDLTR PRIDE
CNDP2_HUMAN_403 11 403 413 TVFGVEPDLTR PRIDE
CNDP2_HUMAN_413 17 413 429 EGGSIPVTLTFQEATGK PRIDE
CNDP2_HUMAN_414 17 414 430 EGGSIPVTLTFQEATGK PRIDE
CNDP2_HUMAN_43 10 43 52 MMEVAAADVK PRIDE
CNDP2_HUMAN_54 13 54 66 QLGGSVELVDIGK PRIDE
CNDP2_HUMAN_66 18 66 83 QKLPDGSEIPLPPILLGR PRIDE
CNDP2_HUMAN_67 18 67 84 QKLPDGSEIPLPPILLGR PRIDE
CNDP2_HUMAN_8 10 8 17 FKYIDENQDR PRIDE
CNDP2_HUMAN_92 32 92 123 TVCIYGHLDVQPAALEDGWDSEPFTLVERDGK PRIDE
PAp00002342 21 160 180 FCLEGMEESGSEGLDELIFAR Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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