AutismKB 2.0

Annotation Detail for OGDHL


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Basic Information Top
Gene Symbol:OGDHL ( - )
Gene Full Name: oxoglutarate dehydrogenase-like
Band: 10q11.23
Quick LinksEntrez ID:55753; OMIM: NA; Uniprot ID:OGDHL_HUMAN; ENSEMBL ID: ENSG00000197444; HGNC ID: 25590
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst3 / 6231948
fetus9 / 56401215
neonate0 / 310970 
infant0 / 236200 
juvenile2 / 5555635
adult30 / 193912115
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma1 / 1747557
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor6 / 26384522
glioma1 / 1068839
head and neck tumor2 / 13630214
kidney tumor5 / 6895972
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor2 / 10312719
lymphoma0 / 717550 
non-neoplasia3 / 9725030
normal308 / 336030791
ovarian tumor1 / 7668213
pancreatic tumor13 / 104616124
primitive neuroectodermal tumor of the CNS10 / 12568079
prostate cancer0 / 1026800 
retinoblastoma1 / 4635621
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor2 / 12519115
uterine tumor2 / 9025722
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone0 / 716550 
bone marrow0 / 488010 
brain268 / 1100989243
cervix0 / 481710 
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue5 / 21572223
esophagus0 / 202090 
eye9 / 21105442
heart0 / 896260 
intestine0 / 2344720 
kidney26 / 211777122
larynx0 / 241450 
liver1 / 2077434
lung3 / 3369748
lymph0 / 442700 
lymph node0 / 916100 
mammary gland0 / 1532710 
mouth0 / 670520 
muscle1 / 1077159
nerve2 / 15768126
ovary1 / 1020519
pancreas13 / 21481260
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland2 / 16585120
placenta0 / 2808250 
prostate0 / 1893450 
salivary gland1 / 2015549
skin0 / 2105740 
spleen0 / 539520 
stomach0 / 966190 
testis8 / 33044224
thymus1 / 8113112
thyroid2 / 4747342
tonsil0 / 169990 
trachea1 / 5241319
umbilical cord2 / 13680146
uterus4 / 23287817
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 219277_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts5.4
Adipocyte4.35
AdrenalCortex4.55
Adrenalgland3.7
Amygdala28.4
Appendix4.4
AtrioventricularNode3.45
BDCA4+_DentriticCells4.75
Bonemarrow4.25
BronchialEpithelialCells4.3
CD105+_Endothelial4.4
CD14+_Monocytes4.65
CD19+_BCells(neg._sel.)4.7
CD33+_Myeloid5.6
CD34+5.65
CD4+_Tcells4.75
CD56+_NKCells5.3
CD71+_EarlyErythroid4.1
CD8+_Tcells4.2
CardiacMyocytes5.6
Caudatenucleus10.8
Cerebellum25.65
CerebellumPeduncles28.2
CiliaryGanglion3.1
CingulateCortex70.4
Colorectaladenocarcinoma4.4
DorsalRootGanglion3.4
FetalThyroid24.55
Fetalbrain4.5
Fetalliver3.8
Fetallung3.7
GlobusPallidus6.25
Heart5.7
Hypothalamus90.85
Kidney234.8
Leukemia_chronicMyelogenousK-5623.95
Leukemia_promyelocytic-HL-603.85
Leukemialymphoblastic(MOLT-4)3.6
Liver110.6
Lung4.85
Lymphnode3.75
Lymphoma_burkitts(Daudi)5.6
Lymphoma_burkitts(Raji)6.15
MedullaOblongata8.8
OccipitalLobe14.8
OlfactoryBulb3.45
Ovary2.9
Pancreas3.5
PancreaticIslet4.7
ParietalLobe12.45
Pituitary18.2
Placenta4.45
Pons7.3
PrefrontalCortex111.8
Prostate5.15
Salivarygland3.5
SkeletalMuscle4.85
Skin3.35
SmoothMuscle5
Spinalcord4.7
SubthalamicNucleus19.45
SuperiorCervicalGanglion5.2
TemporalLobe16.05
Testis3.8
TestisGermCell3.65
TestisIntersitial3.7
TestisLeydigCell4.35
TestisSeminiferousTubule3.75
Thalamus62.6
Thymus3.45
Thyroid56.2
Tongue4.25
Tonsil4.25
Trachea3.65
TrigeminalGanglion4.45
Uterus3.6
UterusCorpus3.85
WholeBlood4.75
Wholebrain117.85
colon4.4
pineal_day540.36
pineal_night471.28
retina20.475
small_intestine4.2
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P161297
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala10.19 ± 0.38
Basal Forebrain10.88 ± 0.12
Basal Part of Pons11.23 ± 0.19
Cerebellar Cortex10.97 ± 0.17
Cerebellar Nuclei11.24 ± 0.44
Claustrum10.32 ± 0.3
Epithalamus10.35 ± 0.4
Frontal Lobe10.8 ± 0.45
Globus Pallidus10.53 ± 0.28
Hypothalamus10.7 ± 0.42
Insula10.68 ± 0.23
Limbic Lobe10.64 ± 0.38
Mesencephalon10.64 ± 0.42
Myelencephalon10.69 ± 0.46
Occipital Lobe10.79 ± 0.17
Parietal Lobe10.87 ± 0.26
Pontine Tegmentum10.74 ± 0.33
Striatum10.93 ± 0.3
Subthalamus11.57 ± 0.17
Temporal Lobe10.62 ± 0.36
Thalamus10.9 ± 0.26
White Matter8.52 ± 0.39
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
LOC239017CBCerebellum3.36
4.13
LOC239017CTXCerebral cortex3.24
2.87
LOC239017HIPHippocampal region2.15
2.14
LOC239017HPFHippocampal formation2.21
1.98
LOC239017HYHypothalamus0.6
0.5
LOC239017LSXLateral septal complex0.08
0.04
LOC239017MBMidbrain2.94
3.24
LOC239017MYMedulla6.97
8.53
LOC239017OLFOlfactory bulb2.82
2.47
LOC239017PPons4.47
5.64
LOC239017PALPallidum1.28
1.19
LOC239017RHPRetrohippocampal region2.36
1.82
LOC239017sAMYStriatum-like amygdalar nuclei0.49
0.47
LOC239017STRStriatum0.42
0.55
LOC239017STRdStriatum dorsal region0.45
0.73
LOC239017STRvStriatum ventral region0.39
0.25
LOC239017THThalamus1.33
1.15
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00074297 13 110 122 LVEDHLAVQSLIR Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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