AutismKB 2.0

Annotation Detail for MCTP2


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Basic Information Top
Gene Symbol:MCTP2 ( FLJ11175,FLJ33303,MGC111402 )
Gene Full Name: multiple C2 domains, transmembrane 2
Band: 15q26.2
Quick LinksEntrez ID:55784; OMIM: NA; Uniprot ID:MCTP2_HUMAN; ENSEMBL ID: ENSG00000140563; HGNC ID: 25636
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus15 / 56401226
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult47 / 193912124
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor1 / 9417810
cervical tumor0 / 343660 
chondrosarcoma2 / 8282324
colorectal tumor5 / 11424643
esophageal tumor0 / 172900 
gastrointestinal tumor2 / 11936916
germ cell tumor1 / 2638453
glioma2 / 10688318
head and neck tumor2 / 13630214
kidney tumor0 / 689590 
leukemia2 / 9584220
liver tumor1 / 9635910
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal67 / 336030719
ovarian tumor3 / 7668239
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood6 / 12347848
bone2 / 7165527
bone marrow0 / 488010 
brain4 / 11009893
cervix0 / 481710 
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus0 / 202090 
eye6 / 21105428
heart0 / 896260 
intestine8 / 23447234
kidney0 / 2117770 
larynx0 / 241450 
liver3 / 20774314
lung3 / 3369748
lymph0 / 442700 
lymph node9 / 9161098
mammary gland1 / 1532716
mouth2 / 6705229
muscle3 / 10771527
nerve0 / 157680 
ovary3 / 10205129
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland1 / 1658560
placenta15 / 28082553
prostate2 / 18934510
salivary gland0 / 201550 
skin0 / 2105740 
spleen1 / 5395218
stomach2 / 9661920
testis1 / 3304423
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea6 / 52413114
umbilical cord0 / 136800 
uterus4 / 23287817
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 220603_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts14.85
Adipocyte9.45
AdrenalCortex10.85
Adrenalgland9.25
Amygdala13.9
Appendix46.1
AtrioventricularNode9.95
BDCA4+_DentriticCells9.8
Bonemarrow17.45
BronchialEpithelialCells10.6
CD105+_Endothelial11.35
CD14+_Monocytes11.1
CD19+_BCells(neg._sel.)21.65
CD33+_Myeloid13
CD34+47.8
CD4+_Tcells13.3
CD56+_NKCells51.15
CD71+_EarlyErythroid11.3
CD8+_Tcells12.25
CardiacMyocytes15
Caudatenucleus9.35
Cerebellum8.55
CerebellumPeduncles11.4
CiliaryGanglion8.3
CingulateCortex13.1
Colorectaladenocarcinoma10.75
DorsalRootGanglion10.2
FetalThyroid10.25
Fetalbrain10.25
Fetalliver10.55
Fetallung17.2
GlobusPallidus7.5
Heart16.55
Hypothalamus10.55
Kidney9.1
Leukemia_chronicMyelogenousK-56210.1
Leukemia_promyelocytic-HL-6012.4
Leukemialymphoblastic(MOLT-4)9.5
Liver14.8
Lung11.7
Lymphnode10.2
Lymphoma_burkitts(Daudi)14.6
Lymphoma_burkitts(Raji)16.35
MedullaOblongata14.45
OccipitalLobe9.2
OlfactoryBulb10.4
Ovary7.4
Pancreas8.85
PancreaticIslet15.5
ParietalLobe10.7
Pituitary13.1
Placenta21.6
Pons12.65
PrefrontalCortex10.95
Prostate15.45
Salivarygland8.9
SkeletalMuscle14
Skin9.35
SmoothMuscle10.7
Spinalcord10.85
SubthalamicNucleus9.5
SuperiorCervicalGanglion22.8
TemporalLobe10
Testis8.9
TestisGermCell9.85
TestisIntersitial9.1
TestisLeydigCell10.85
TestisSeminiferousTubule8.6
Thalamus10.5
Thymus7.9
Thyroid39.05
Tongue11.95
Tonsil10.5
Trachea13.8
TrigeminalGanglion13
Uterus8.85
UterusCorpus10
WholeBlood164.75
Wholebrain8.15
colon23.8
pineal_day12.02
pineal_night12.46
retina12.75
small_intestine15.15
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P65789
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2.79 ± 1.03
Basal Forebrain2.38 ± 0.25
Basal Part of Pons2.05 ± 0.37
Cerebellar Cortex2.1 ± 0.56
Cerebellar Nuclei2.67 ± 0.74
Claustrum3.45 ± 0.93
Epithalamus2.26 ± 0.92
Frontal Lobe2.34 ± 0.66
Globus Pallidus2.75 ± 0.33
Hypothalamus3.21 ± 0.98
Insula2.29 ± 0.54
Limbic Lobe2.36 ± 0.61
Mesencephalon2.52 ± 0.68
Myelencephalon2.41 ± 0.7
Occipital Lobe2.31 ± 0.61
Parietal Lobe2.51 ± 0.73
Pontine Tegmentum2.48 ± 0.72
Striatum2.62 ± 0.72
Subthalamus2.56 ± 0.73
Temporal Lobe2.27 ± 0.76
Thalamus2.31 ± 0.6
White Matter2.7 ± 0.12
Mouse Brain ISH
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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