AutismKB 2.0

Annotation Detail for TXLNG


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Basic Information Top
Gene Symbol:TXLNG ( CXorf15,ELRG,FIAT,FLJ11209,FLJ33481,LSR5,MGC126621,MGC126625 )
Gene Full Name: taxilin gamma
Band: Xp22.2
Quick LinksEntrez ID:55787; OMIM: 300677; Uniprot ID:TXLNG_HUMAN; ENSEMBL ID: ENSG00000086712; HGNC ID: 18578
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body3 / 7076142
blastocyst3 / 6231948
fetus19 / 56401233
neonate0 / 310970 
infant0 / 236200 
juvenile1 / 5555617
adult62 / 193912131
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma5 / 8282360
colorectal tumor8 / 11424670
esophageal tumor0 / 172900 
gastrointestinal tumor7 / 11936958
germ cell tumor15 / 26384556
glioma1 / 1068839
head and neck tumor1 / 1363027
kidney tumor0 / 689590 
leukemia1 / 9584210
liver tumor2 / 9635920
lung tumor1 / 1031279
lymphoma2 / 7175527
non-neoplasia0 / 972500 
normal78 / 336030723
ovarian tumor2 / 7668226
pancreatic tumor2 / 10461619
primitive neuroectodermal tumor of the CNS1 / 1256807
prostate cancer7 / 10268068
retinoblastoma1 / 4635621
skin tumor2 / 12494916
soft tissue/muscle tissue tumor4 / 12519131
uterine tumor4 / 9025744
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue2 / 13106152
adrenal gland1 / 3319730
ascites6 / 40015149
bladder1 / 2975733
blood2 / 12347816
bone6 / 7165583
bone marrow0 / 488010 
brain22 / 110098919
cervix0 / 481710 
connective tissue1 / 1492556
ear0 / 162120 
embryonic tissue10 / 21572246
esophagus0 / 202090 
eye2 / 2110549
heart3 / 8962633
intestine11 / 23447246
kidney6 / 21177728
larynx0 / 241450 
liver4 / 20774319
lung10 / 33697429
lymph0 / 442700 
lymph node4 / 9161043
mammary gland2 / 15327113
mouth1 / 6705214
muscle0 / 1077150 
nerve0 / 157680 
ovary3 / 10205129
pancreas3 / 21481213
parathyroid0 / 205390 
pharynx1 / 4132824
pituitary gland0 / 165850 
placenta5 / 28082517
prostate10 / 18934552
salivary gland0 / 201550 
skin2 / 2105749
spleen1 / 5395218
stomach1 / 9661910
testis6 / 33044218
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus8 / 23287834
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 219969_at
Cell line Expression level Expression bar
721_B_lymphoblasts5.1
Adipocyte3.9
AdrenalCortex4.25
Adrenalgland3.45
Amygdala4.2
Appendix4.05
AtrioventricularNode3.2
BDCA4+_DentriticCells4.25
Bonemarrow4.05
BronchialEpithelialCells3.95
CD105+_Endothelial4.05
CD14+_Monocytes4.25
CD19+_BCells(neg._sel.)4.2
CD33+_Myeloid5.05
CD34+5.05
CD4+_Tcells4.3
CD56+_NKCells4.55
CD71+_EarlyErythroid3.7
CD8+_Tcells3.85
CardiacMyocytes5.3
Caudatenucleus3.6
Cerebellum3.25
CerebellumPeduncles4.55
CiliaryGanglion2.8
CingulateCortex4.1
Colorectaladenocarcinoma3.95
DorsalRootGanglion3.05
FetalThyroid3.85
Fetalbrain3.95
Fetalliver3.5
Fetallung3.3
GlobusPallidus2.95
Heart5.2
Hypothalamus4.4
Kidney3.35
Leukemia_chronicMyelogenousK-5623.6
Leukemia_promyelocytic-HL-603.5
Leukemialymphoblastic(MOLT-4)3.25
Liver5.3
Lung4.45
Lymphnode3.45
Lymphoma_burkitts(Daudi)5.2
Lymphoma_burkitts(Raji)5.75
MedullaOblongata3.6
OccipitalLobe3.6
OlfactoryBulb3.1
Ovary2.65
Pancreas3.2
PancreaticIslet4.25
ParietalLobe4.2
Pituitary4.65
Placenta4.1
Pons3.8
PrefrontalCortex4.85
Prostate4.7
Salivarygland3.25
SkeletalMuscle4.7
Skin3.2
SmoothMuscle4.55
Spinalcord4.25
SubthalamicNucleus3.7
SuperiorCervicalGanglion5.05
TemporalLobe3.65
Testis3.45
TestisGermCell3.35
TestisIntersitial3.3
TestisLeydigCell4.05
TestisSeminiferousTubule3.4
Thalamus4.1
Thymus3.1
Thyroid4.95
Tongue4
Tonsil3.9
Trachea3.3
TrigeminalGanglion4.1
Uterus3.3
UterusCorpus3.6
WholeBlood4.3
Wholebrain3.35
colon4.05
pineal_day4.94
pineal_night4.84
retina4.825
small_intestine3.85
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P146997
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala7.89 ± 0.22
Basal Forebrain7.93 ± 0.1
Basal Part of Pons7.63 ± 0.26
Cerebellar Cortex7.68 ± 0.16
Cerebellar Nuclei7.61 ± 0.14
Claustrum7.96 ± 0.23
Epithalamus8.03 ± 0.35
Frontal Lobe7.64 ± 0.22
Globus Pallidus7.64 ± 0.28
Hypothalamus7.79 ± 0.29
Insula7.77 ± 0.15
Limbic Lobe7.7 ± 0.3
Mesencephalon7.83 ± 0.37
Myelencephalon7.74 ± 0.34
Occipital Lobe8.16 ± 0.31
Parietal Lobe7.84 ± 0.24
Pontine Tegmentum7.76 ± 0.32
Striatum8.32 ± 0.28
Subthalamus7.81 ± 0.3
Temporal Lobe7.67 ± 0.27
Thalamus7.81 ± 0.26
White Matter8.12 ± 0.07
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
4932441K18RikCBCerebellum2.13
2.96
4932441K18RikCTXCerebral cortex0.81
1.08
4932441K18RikHIPHippocampal region1.46
1.6
4932441K18RikHPFHippocampal formation1.08
1.08
4932441K18RikHYHypothalamus0.24
0.35
4932441K18RikLSXLateral septal complex0.22
0.19
4932441K18RikMBMidbrain0.91
1.33
4932441K18RikMYMedulla3.75
4.08
4932441K18RikOLFOlfactory bulb1.01
1.08
4932441K18RikPPons1.37
1.51
4932441K18RikPALPallidum0.21
0.31
4932441K18RikRHPRetrohippocampal region0.36
0.31
4932441K18RiksAMYStriatum-like amygdalar nuclei1.41
1.36
4932441K18RikSTRStriatum0.49
0.41
4932441K18RikSTRdStriatum dorsal region0.35
0.29
4932441K18RikSTRvStriatum ventral region0.42
0.24
4932441K18RikTHThalamus0.75
0.88
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00009196 26 52 77 ADMLCNSQSNDILQHQGSNCGGTSNK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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