Annotation Detail for PAG1
Basic Information Top
| Gene Symbol: | PAG1 ( CBP,FLJ37858,MGC138364,PAG ) |
|---|---|
| Gene Full Name: | phosphoprotein associated with glycosphingolipid microdomains 1 |
| Band: | 8q21.13 |
| Quick Links | Entrez ID:55824; OMIM: 605767; Uniprot ID:PAG1_HUMAN; ENSEMBL ID: ENSG00000076641; HGNC ID: 30043 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.266175
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 24 / 564012 | 42 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 4 / 55556 | 71 |  |
| adult | 56 / 1939121 | 28 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 2 / 94178 | 21 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 3 / 82823 | 36 | |
| colorectal tumor | 2 / 114246 | 17 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 1 / 119369 | 8 |  |
| germ cell tumor | 4 / 263845 | 15 | |
| glioma | 1 / 106883 | 9 | |
| head and neck tumor | 1 / 136302 | 7 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 9 / 95842 | 93 | |
| liver tumor | 3 / 96359 | 31 | |
| lung tumor | 2 / 103127 | 19 | |
| lymphoma | 5 / 71755 | 69 | |
| non-neoplasia | 11 / 97250 | 113 | |
| normal | 132 / 3360307 | 39 | |
| ovarian tumor | 2 / 76682 | 26 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 4 / 102680 | 38 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 6 / 124949 | 48 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 2 / 90257 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 1 / 29757 | 33 | |
| blood | 11 / 123478 | 89 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 5 / 48801 | 102 | |
| brain | 40 / 1100989 | 36 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 7 / 149255 | 46 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 2 / 215722 | 9 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 10 / 211054 | 47 | |
| heart | 1 / 89626 | 11 | |
| intestine | 6 / 234472 | 25 | |
| kidney | 5 / 211777 | 23 | |
| larynx | 0 / 24145 | 0 | |
| liver | 4 / 207743 | 19 | |
| lung | 10 / 336974 | 29 | |
| lymph | 1 / 44270 | 22 | |
| lymph node | 22 / 91610 | 240 |  |
| mammary gland | 2 / 153271 | 13 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 2 / 107715 | 18 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 1 / 102051 | 9 | |
| pancreas | 0 / 214812 | 0 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 11 / 280825 | 39 | |
| prostate | 5 / 189345 | 26 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 14 / 210574 | 66 | |
| spleen | 4 / 53952 | 74 | |
| stomach | 0 / 96619 | 0 | |
| testis | 0 / 330442 | 0 | |
| thymus | 9 / 81131 | 110 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 2 / 52413 | 38 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 6 / 232878 | 25 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_32_P61684
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 6.52 ± 0.54 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 6.92 ± 0.28 | |
| Basal Part of Pons | 7.14 ± 0.5 | |
| Cerebellar Cortex | 7.49 ± 0.37 | |
| Cerebellar Nuclei | 7.33 ± 0.3 | |
| Claustrum | 5.79 ± 0.71 | |
| Epithalamus | 6.42 ± 0.59 | |
| Frontal Lobe | 6.94 ± 0.45 | |
| Globus Pallidus | 6.51 ± 0.33 | |
| Hypothalamus | 6.91 ± 0.27 | |
| Insula | 6.89 ± 0.28 | |
| Limbic Lobe | 6.48 ± 0.41 | |
| Mesencephalon | 6.67 ± 0.54 | |
| Myelencephalon | 6.84 ± 0.56 | |
| Occipital Lobe | 6.89 ± 0.38 | |
| Parietal Lobe | 6.98 ± 0.49 | |
| Pontine Tegmentum | 6.78 ± 0.52 | |
| Striatum | 6.58 ± 0.41 | |
| Subthalamus | 7 ± 0.44 | |
| Temporal Lobe | 6.72 ± 0.47 | |
| Thalamus | 7.23 ± 0.45 | |
| White Matter | 6.5 ± 0.44 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Pag1 | CB | Cerebellum | 19.45 | |
| 25.35 | | |||
| Pag1 | CTX | Cerebral cortex | 15.28 | |
| 11.19 | | |||
| Pag1 | HIP | Hippocampal region | 11.55 | |
| 11.08 | | |||
| Pag1 | HPF | Hippocampal formation | 12.39 | |
| 10.85 | | |||
| Pag1 | HY | Hypothalamus | 8.84 | |
| 6.23 | | |||
| Pag1 | LSX | Lateral septal complex | 24.95 | |
| 19.46 | | |||
| Pag1 | MB | Midbrain | 5.55 | |
| 4.92 | | |||
| Pag1 | MY | Medulla | 17.33 | |
| 17.91 | | |||
| Pag1 | OLF | Olfactory bulb | 31.47 | |
| 28.96 | | |||
| Pag1 | P | Pons | 11.37 | |
| 10.08 | | |||
| Pag1 | PAL | Pallidum | 9.1 | |
| 7.01 | | |||
| Pag1 | RHP | Retrohippocampal region | 14.48 | |
| 11.09 | | |||
| Pag1 | sAMY | Striatum-like amygdalar nuclei | 10.21 | |
| 7.93 | | |||
| Pag1 | STR | Striatum | 11.6 | |
| 8.58 | | |||
| Pag1 | STRd | Striatum dorsal region | 8.54 | |
| 6.38 | | |||
| Pag1 | STRv | Striatum ventral region | 15.81 | |
| 10.59 | | |||
| Pag1 | TH | Thalamus | 12.95 | |
| 9.97 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00000289 | 11 | 222 | 232 | AEFAEYASVDR | Peptide Atlas |